RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PRR16Q569H4 304 aa15.83■□□□□ 0.13
HIF3A-202ENST00000244303 HAUS3Q68CZ6 603 aa15.83■□□□□ 0.13
HIF3A-202ENST00000244303 CATSPER3Q86XQ3 398 aa15.83■□□□□ 0.13
HIF3A-202ENST00000244303 ZC3H3Q8IXZ2 948 aaKnown RBP15.83■□□□□ 0.13
HIF3A-202ENST00000244303 AFAP1L1Q8TED9 768 aa15.83■□□□□ 0.13
HIF3A-202ENST00000244303 TBC1D5Q92609 795 aa15.83■□□□□ 0.13
HIF3A-202ENST00000244303 MKL1Q969V6 931 aa15.83■□□□□ 0.13
HIF3A-202ENST00000244303 SLC26A4O43511 780 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 PSMC6P62333 389 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 GOLGA6L1Q8N7Z2 621 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 FAM133AQ8N9E0 248 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 ETNPPLQ8TBG4 499 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 CRYGNQ8WXF5 182 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 RUBCNQ92622 972 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 MS4A14Q96JA4 679 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 NYAP2Q9P242 653 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 SERPINA10Q9UK55 444 aa15.83■□□□□ 0.12
HIF3A-202ENST00000244303 MEIS1O00470 390 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 NPM3O75607 178 aaKnown RBP15.82■□□□□ 0.12
HIF3A-202ENST00000244303 NR2F2P24468 414 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 KLRC1P26715 233 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 KCNH2Q12809 1159 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 AP3B2Q13367 1082 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 ENOX2Q16206 610 aaKnown RBP15.82■□□□□ 0.12
HIF3A-202ENST00000244303 SLC18A3Q16572 532 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 EDRF1Q3B7T1 1238 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 MOXD1Q6UVY6 613 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 SND1Q7KZF4 910 aaKnown RBP eCLIP15.82■□□□□ 0.12
HIF3A-202ENST00000244303 C10orf67Q8IYJ2 551 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.82■□□□□ 0.12
HIF3A-202ENST00000244303 GANQ9H2C0 597 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 RASSF4Q9H2L5 321 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 RBM12Q9NTZ6 932 aaKnown RBP15.82■□□□□ 0.12
HIF3A-202ENST00000244303 A0A087X0T9 212 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 GOLGA6BA6NDN3 693 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 SMCHD1A6NHR9 2005 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 CETN3O15182 167 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 PALMO75781 387 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 FAM228BP0C875 321 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 PABPC4Q13310 644 aaKnown RBP eCLIP15.82■□□□□ 0.12
HIF3A-202ENST00000244303 GIT2Q14161 759 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 SLC15A2Q16348 729 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 TATDN1Q6P1N9 297 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.82■□□□□ 0.12
HIF3A-202ENST00000244303 SIAH1Q8IUQ4 282 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 LUC7LQ9NQ29 371 aaKnown RBP15.82■□□□□ 0.12
HIF3A-202ENST00000244303 STIM2Q9P246 746 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 TSKSQ9UJT2 592 aa15.82■□□□□ 0.12
HIF3A-202ENST00000244303 RPS6KA5O75582 802 aa15.81■□□□□ 0.12
HIF3A-202ENST00000244303 KLHL30Q0D2K2 578 aa15.81■□□□□ 0.12
HIF3A-202ENST00000244303 NAB2Q15742 525 aa15.81■□□□□ 0.12
HIF3A-202ENST00000244303 USH1GQ495M9 461 aa15.81■□□□□ 0.12
HIF3A-202ENST00000244303 C8orf74Q6P047 294 aa15.81■□□□□ 0.12
HIF3A-202ENST00000244303 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
HIF3A-202ENST00000244303 AIPL1Q9NZN9 384 aa15.81■□□□□ 0.12
HIF3A-202ENST00000244303 ADAMTS1Q9UHI8 967 aa15.81■□□□□ 0.12
HIF3A-202ENST00000244303 HDAC9Q9UKV0 1011 aa15.81■□□□□ 0.12
HIF3A-202ENST00000244303 FTCDO95954 541 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 SPATA31C1P0DKV0 1188 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 TAL1P17542 331 aaPredicted RBP15.8■□□□□ 0.12
HIF3A-202ENST00000244303 DNA2P51530 1060 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 ICA1Q05084 483 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 ASIC2Q16515 512 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 CFAP221Q4G0U5 840 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 SFR1Q86XK3 245 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 LENG9Q96B70 501 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 ZFP91Q96JP5 570 aaPredicted RBP15.8■□□□□ 0.12
HIF3A-202ENST00000244303 REEP2Q9BRK0 252 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 AMNQ9BXJ7 453 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 PACSIN1Q9BY11 444 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
HIF3A-202ENST00000244303 FAM86B1E9PN63 330 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 MYO1CO00159 1063 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 IVLP07476 585 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 FAM86B2P0C5J1 330 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 ACTN1P12814 892 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 RPA1P27694 616 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 KIAA0753Q2KHM9 967 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 Q4G0T1 1027 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 FOXR1Q6PIV2 292 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 SYT2Q8N9I0 419 aaPredicted RBP15.8■□□□□ 0.12
HIF3A-202ENST00000244303 ERMNQ8TAM6 284 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 DNM3Q9UQ16 869 aa15.8■□□□□ 0.12
HIF3A-202ENST00000244303 ZNF646O15015 1829 aaPredicted RBP15.8■□□□□ 0.12
HIF3A-202ENST00000244303 GOLGB1Q14789 3259 aaKnown RBP15.8■□□□□ 0.12
HIF3A-202ENST00000244303 F5H6K3 240 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 TBX3O15119 743 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 GDF11O95390 407 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 SLC9A1P19634 815 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 HOXD13P35453 343 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 EPHB4P54760 987 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 KLRC3Q07444 240 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 LRRC31Q6UY01 552 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 PACSIN2Q9UNF0 486 aaPredicted RBP15.79■□□□□ 0.12
HIF3A-202ENST00000244303 TRAF3IP3Q9Y228 551 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 SPDYE3A6NKU9 549 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 MYBP10242 640 aa15.79■□□□□ 0.12
HIF3A-202ENST00000244303 IKQ13123 557 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms