RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 GABBR1Q9UBS5 961 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 A0A087WWV3 80 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 H3BRB1 525 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 CUTAO60888 179 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 LGALS2P05162 132 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 SPATA31C1P0DKV0 1188 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 EN2P19622 333 aaPredicted RBP11.42□□□□□ -0.58
HMGCL-201ENST00000235958 UBA7P41226 1012 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
HMGCL-201ENST00000235958 ACLYP53396 1101 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 PURAQ00577 322 aaKnown RBP11.42□□□□□ -0.58
HMGCL-201ENST00000235958 ADALQ6DHV7 355 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 PDXDC2PQ6P474 469 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 USP49Q70CQ1 688 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 PLPPR4Q7Z2D5 763 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 CCDC60Q8IWA6 550 aaPredicted RBP11.42□□□□□ -0.58
HMGCL-201ENST00000235958 TPH2Q8IWU9 490 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
HMGCL-201ENST00000235958 KAT2BQ92831 832 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 ABHD8Q96I13 439 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 DYDC2Q96IM9 177 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 EPSTI1Q96J88 318 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 AK8Q96MA6 479 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
HMGCL-201ENST00000235958 RNPEPQ9H4A4 650 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 TUT1Q9H6E5 874 aaKnown RBP11.42□□□□□ -0.58
HMGCL-201ENST00000235958 AZI2Q9H6S1 392 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 ZNF302Q9NR11 478 aa11.42□□□□□ -0.58
HMGCL-201ENST00000235958 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
HMGCL-201ENST00000235958 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 DNM1LO00429 736 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 ZNF862O60290 1169 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 ZNF286BP0CG31 522 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 CAPN2P17655 700 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 ATP4AP20648 1035 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 RPA1P27694 616 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 CCT6AP40227 531 aaKnown RBP11.41□□□□□ -0.58
HMGCL-201ENST00000235958 QARSP47897 775 aaKnown RBP11.41□□□□□ -0.58
HMGCL-201ENST00000235958 CHMP4BP1P59074 171 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 PSMC5P62195 406 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 CYP4A11Q02928 519 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 CTTNQ14247 550 aaKnown RBP11.41□□□□□ -0.58
HMGCL-201ENST00000235958 FAM160B1Q5W0V3 765 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 KRT79Q5XKE5 535 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 TRMT1LQ7Z2T5 733 aaKnown RBP11.41□□□□□ -0.58
HMGCL-201ENST00000235958 TRIM50Q86XT4 487 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 BANK1Q8NDB2 785 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 ERMNQ8TAM6 284 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 AFAP1L1Q8TED9 768 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 MTG1Q9BT17 334 aaPredicted RBP11.41□□□□□ -0.58
HMGCL-201ENST00000235958 POLR3CQ9BUI4 534 aaPredicted RBP11.41□□□□□ -0.58
HMGCL-201ENST00000235958 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 CCSER1Q9C0I3 900 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 STK24Q9Y6E0 443 aa11.41□□□□□ -0.58
HMGCL-201ENST00000235958 TRIP12Q14669 1992 aaPredicted RBP11.4□□□□□ -0.58
HMGCL-201ENST00000235958 MOXD2PA6NHM9 499 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 DDX11L8A8MPP1 907 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 ZBTB39O15060 712 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 MED24O75448 989 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 STBD1O95210 358 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 MARK3P27448 753 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 PSEN2P49810 448 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 ZRSR1Q15695 479 aaKnown RBP11.4□□□□□ -0.58
HMGCL-201ENST00000235958 ECM1Q16610 540 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 UGCGQ16739 394 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 KIAA0753Q2KHM9 967 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 TPRNQ4KMQ1 711 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 SHC4Q6S5L8 630 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 CABP7Q86V35 215 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 SENP6Q9GZR1 1112 aaPredicted RBP11.4□□□□□ -0.58
HMGCL-201ENST00000235958 ZSWIM4Q9H7M6 989 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 TUFT1Q9NNX1 390 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 NRBP2Q9NSY0 501 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 ERAP1Q9NZ08 941 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 WRAP73Q9P2S5 460 aaPredicted RBP11.4□□□□□ -0.58
HMGCL-201ENST00000235958 PHF24Q9UPV7 400 aa11.4□□□□□ -0.58
HMGCL-201ENST00000235958 FRMPD3Q5JV73 1810 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 GRIN2DO15399 1336 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 POTEB3A0JP26 581 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 CCDC85CA6NKD9 419 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 HAS3O00219 553 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 DKC1O60832 514 aaKnown RBP eCLIP11.39□□□□□ -0.59
HMGCL-201ENST00000235958 CABYRO75952 493 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 F2P00734 622 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 XRCC6P12956 609 aaKnown RBP eCLIP11.39□□□□□ -0.59
HMGCL-201ENST00000235958 CMA1P23946 247 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 SLC26A2P50443 739 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 PSMC6P62333 389 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 MFSD10Q14728 455 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 PLCB4Q15147 1175 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 POTEBQ6S5H4 581 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 C4orf19Q8IY42 314 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 NEK9Q8TD19 979 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms