RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 KDM3AQ9Y4C1 1321 aa20.28■□□□□ 0.84
CACTIN-201ENST00000221899 MPHOSPH10O00566 681 aaKnown RBP20.27■□□□□ 0.84
CACTIN-201ENST00000221899 PPP1R37O75864 691 aa20.27■□□□□ 0.84
CACTIN-201ENST00000221899 SNHG28P0DPA3 235 aa20.27■□□□□ 0.84
CACTIN-201ENST00000221899 ARSHQ5FYA8 562 aa20.27■□□□□ 0.84
CACTIN-201ENST00000221899 FOXR2Q6PJQ5 311 aa20.27■□□□□ 0.84
CACTIN-201ENST00000221899 B4GALNT4Q76KP1 1039 aa20.27■□□□□ 0.84
CACTIN-201ENST00000221899 OTUD6BQ8N6M0 293 aa20.27■□□□□ 0.84
CACTIN-201ENST00000221899 CNBD1Q8NA66 436 aa20.27■□□□□ 0.84
CACTIN-201ENST00000221899 DDX47Q9H0S4 455 aaKnown RBP20.27■□□□□ 0.84
CACTIN-201ENST00000221899 NEUROG2Q9H2A3 272 aa20.27■□□□□ 0.84
CACTIN-201ENST00000221899 MRPL12P52815 198 aaKnown RBP20.27■□□□□ 0.83
CACTIN-201ENST00000221899 MARSP56192 900 aaKnown RBP20.27■□□□□ 0.83
CACTIN-201ENST00000221899 PTGISQ16647 500 aa20.27■□□□□ 0.83
CACTIN-201ENST00000221899 IRF2BP2Q7Z5L9 587 aa20.27■□□□□ 0.83
CACTIN-201ENST00000221899 ZNF473Q8WTR7 871 aaKnown RBP20.27■□□□□ 0.83
CACTIN-201ENST00000221899 MYH4Q9Y623 1939 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 COL24A1Q17RW2 1714 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 UCHL3P15374 230 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 ECHS1P30084 290 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 HSD17B3P37058 310 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 PSMC6P62333 389 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 HDLBPQ00341 1268 aaKnown RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 TCERG1LQ5VWI1 586 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 BARGINQ6ZT62 677 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 CD302Q8IX05 232 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 RPGRQ92834 1020 aaKnown RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 TMEM59LQ9UK28 342 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 CCNL1Q9UK58 526 aaPredicted RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 DAGLAQ9Y4D2 1042 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 A6NNZ2 444 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 MYO1FO00160 1098 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 TTLL1O95922 423 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 MYBP10242 640 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 HSPA9P38646 679 aaKnown RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 MDH1P40925 334 aaKnown RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 ITGB3BPQ13352 177 aaPredicted RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 TUBB8Q3ZCM7 444 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 RBM46Q8TBY0 533 aaKnown RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 BCAS3Q9H6U6 928 aa20.26■□□□□ 0.83
CACTIN-201ENST00000221899 PPANQ9NQ55 473 aaKnown RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 DDX4Q9NQI0 724 aaKnown RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 BCCIPQ9P287 314 aaKnown RBP eCLIP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 AJAP1Q9UKB5 411 aaPredicted RBP20.26■□□□□ 0.83
CACTIN-201ENST00000221899 E7EVH7 732 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 RFC4P35249 363 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 USP11P51784 963 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 PABPC4Q13310 644 aaKnown RBP eCLIP20.25■□□□□ 0.83
CACTIN-201ENST00000221899 ALKBH5Q6P6C2 394 aaKnown RBP20.25■□□□□ 0.83
CACTIN-201ENST00000221899 GJB7Q6PEY0 223 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 ISCUQ9H1K1 167 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 GGA1Q9UJY5 639 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 NAGPAQ9UK23 515 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 NRAPQ86VF7 1730 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 GOLGA6L10A6NI86 522 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 H0YHG0 523 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 ZBTB5O15062 677 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 ITGA4P13612 1032 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 HNRNPH1P31943 449 aaKnown RBP20.25■□□□□ 0.83
CACTIN-201ENST00000221899 FLT3P36888 993 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 HYIQ5T013 277 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 RNF187Q5TA31 235 aaPredicted RBP20.25■□□□□ 0.83
CACTIN-201ENST00000221899 KCNV1Q6PIU1 500 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 METTL13Q8N6R0 699 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 CCT8L2Q96SF2 557 aa20.25■□□□□ 0.83
CACTIN-201ENST00000221899 ARMCX3Q9UH62 379 aaPredicted RBP20.25■□□□□ 0.83
CACTIN-201ENST00000221899 MEFVO15553 781 aaPredicted RBP20.24■□□□□ 0.83
CACTIN-201ENST00000221899 UAP1Q16222 522 aaPredicted RBP20.24■□□□□ 0.83
CACTIN-201ENST00000221899 RC3H1Q5TC82 1133 aaKnown RBP20.24■□□□□ 0.83
CACTIN-201ENST00000221899 NLRP14Q86W24 1093 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 SFR1Q86XK3 245 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 MYCBPAPQ8TBZ2 947 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 DHX36Q9H2U1 1008 aaKnown RBP20.24■□□□□ 0.83
CACTIN-201ENST00000221899 TMBIM4Q9HC24 238 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 NOC2LQ9Y3T9 749 aaKnown RBP20.24■□□□□ 0.83
CACTIN-201ENST00000221899 HMGB1P1B2RPK0 211 aaPredicted RBP20.24■□□□□ 0.83
CACTIN-201ENST00000221899 SART1O43290 800 aaKnown RBP20.24■□□□□ 0.83
CACTIN-201ENST00000221899 IL1R1P14778 569 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 PON1P27169 355 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 GTF2IP78347 998 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 EXOC3L4Q17RC7 722 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 PPP1R18Q6NYC8 613 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 LRRC57Q8N9N7 239 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 NHSQ6T4R5 1651 aa20.24■□□□□ 0.83
CACTIN-201ENST00000221899 RGL2O15211 777 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 AFPP02771 609 aaKnown RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 GCFC2P16383 781 aaKnown RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 HOXA7P31268 230 aaPredicted RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 CTNNA1P35221 906 aaKnown RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 SLC12A3P55017 1021 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 GABPAQ06546 454 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 DPY19L2P1Q6NXN4 242 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 SCFD2Q8WU76 684 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 UBLCP1Q8WVY7 318 aaPredicted RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 AMACRQ9UHK6 382 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 GAKO14976 1311 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 IGKV6D-41A0A0C4DH26 115 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 GCOM1H8Y6P7 765 aaPredicted RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 MYZAPP0CAP1 466 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 GUCY2CP25092 1073 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms