RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 CDR1P51861 262 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 ZNF543Q08ER8 600 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 MYCT1Q8N699 235 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 SCFD1Q8WVM8 642 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 LMBR1Q8WVP7 490 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 HAS1Q92839 578 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 LRRC45Q96CN5 670 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 DNAJC19Q96DA6 116 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 EDEM3Q9BZQ6 932 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 DAGLAQ9Y4D2 1042 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 GRID2IPA4D2P6 1211 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 ZBTB5O15062 677 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 PJA2O43164 708 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 CALUO43852 315 aaPredicted RBP12.22□□□□□ -0.45
NEFM-201ENST00000221166 LSP1P33241 339 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 CDC37Q16543 378 aaPredicted RBP12.22□□□□□ -0.45
NEFM-201ENST00000221166 SLC30A10Q6XR72 485 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 RBM17Q96I25 401 aaKnown RBP12.22□□□□□ -0.45
NEFM-201ENST00000221166 ANO3Q9BYT9 981 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 BHMT2Q9H2M3 363 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 ESYT2A0FGR8 921 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 ZNF233A6NK53 670 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 NOL4O94818 638 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 KIF4AO95239 1232 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 TAL1P17542 331 aaPredicted RBP12.22□□□□□ -0.45
NEFM-201ENST00000221166 RPL13P26373 211 aaKnown RBP12.22□□□□□ -0.45
NEFM-201ENST00000221166 HOXA13P31271 388 aaPredicted RBP12.22□□□□□ -0.45
NEFM-201ENST00000221166 CYP2J2P51589 502 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 LLGL1Q15334 1064 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 CCDC121Q6ZUS5 278 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 CPLX4Q7Z7G2 160 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 TAX1BP1Q86VP1 789 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 TPH2Q8IWU9 490 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 ARFGAP2Q8N6H7 521 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 CCDC114Q96M63 670 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 GCNT4Q9P109 453 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
NEFM-201ENST00000221166 PGRMC1O00264 195 aaKnown RBP12.21□□□□□ -0.45
NEFM-201ENST00000221166 DAPK3O43293 454 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 MED24O75448 989 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 MYBP10242 640 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 CYP11B2P19099 503 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 RDXP35241 583 aaKnown RBP12.21□□□□□ -0.45
NEFM-201ENST00000221166 PSMC6P62333 389 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 SYCP3Q8IZU3 236 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 USP38Q8NB14 1042 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 CCDC26Q8TAB7 109 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 PIGOQ8TEQ8 1089 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 TBC1D22AQ8WUA7 517 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 ATP6V1G3Q96LB4 118 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 SELENOSQ9BQE4 189 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 SART1O43290 800 aaKnown RBP12.21□□□□□ -0.45
NEFM-201ENST00000221166 UCHL3P15374 230 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 SLFN13Q68D06 897 aa12.21□□□□□ -0.45
NEFM-201ENST00000221166 ZNF571Q7Z3V5 609 aaPredicted RBP12.21□□□□□ -0.45
NEFM-201ENST00000221166 IPO4Q8TEX9 1081 aaKnown RBP12.21□□□□□ -0.45
NEFM-201ENST00000221166 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.45
NEFM-201ENST00000221166 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
NEFM-201ENST00000221166 hCG_1984214I3L0E3 225 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 TMOD1P28289 359 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 CASP5P51878 434 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 UBXN2AP68543 259 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.46
NEFM-201ENST00000221166 MEI1Q5TIA1 1274 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 TRIM59Q8IWR1 403 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 ZNF713Q8N859 430 aaPredicted RBP12.21□□□□□ -0.46
NEFM-201ENST00000221166 CAVIN3Q969G5 261 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 CELF4Q9BZC1 486 aaKnown RBP12.21□□□□□ -0.46
NEFM-201ENST00000221166 PKD2L1Q9P0L9 805 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 MYO1FO00160 1098 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 RSPH10BP0C881 870 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 ITIH3Q06033 890 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 ORC2Q13416 577 aaPredicted RBP12.21□□□□□ -0.46
NEFM-201ENST00000221166 SEPT2Q15019 361 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 AMFRQ9UKV5 643 aa12.21□□□□□ -0.46
NEFM-201ENST00000221166 UTP11Q9Y3A2 253 aaKnown RBP12.21□□□□□ -0.46
NEFM-201ENST00000221166 GCFC2P16383 781 aaKnown RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 COPB2P35606 906 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 STAT1P42224 750 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 CASP4P49662 377 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 RHBDL3P58872 404 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 MMS22LQ6ZRQ5 1243 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 CABS1Q96KC9 395 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 FBXL5Q9UKA1 691 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 NOC2LQ9Y3T9 749 aaKnown RBP12.2□□□□□ -0.46
NEFM-201ENST00000221166 BCL9LQ86UU0 1499 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 COL4A1P02462 1669 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 A6NNZ2 444 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 PPP1R37O75864 691 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 ITGA4P13612 1032 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 TNFAIP3P21580 790 aa12.2□□□□□ -0.46
NEFM-201ENST00000221166 ZNF211Q13398 564 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms