RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 CFAP58Q5T655 872 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 KCNV1Q6PIU1 500 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 SEPT14Q6ZU15 432 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 TBC1D31Q96DN5 1066 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 NUP58Q9BVL2 599 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 NAA15Q9BXJ9 866 aaKnown RBP11.52□□□□□ -0.57
VPS18-201ENST00000220509 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 ABCC6O95255 1503 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 ESYT3A0FGR9 886 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 MEIS1O00470 390 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 IRAK1P51617 712 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 RCAN1P53805 252 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.57
VPS18-201ENST00000220509 POTEDQ86YR6 584 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 PDGFDQ9GZP0 370 aaPredicted RBP11.52□□□□□ -0.57
VPS18-201ENST00000220509 TDRD3Q9H7E2 651 aaKnown RBP11.52□□□□□ -0.57
VPS18-201ENST00000220509 ZNF277Q9NRM2 450 aaPredicted RBP11.52□□□□□ -0.57
VPS18-201ENST00000220509 PANK4Q9NVE7 773 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 USP54Q70EL1 1684 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 ARHGEF35A5YM69 484 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 CHUKO15111 745 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 OPA1O60313 960 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 AKR1B1P15121 316 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 KRT31Q15323 416 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 CCDC121Q6ZUS5 278 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 NIM1KQ8IY84 436 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS18-201ENST00000220509 DHRS1Q96LJ7 313 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 AMNQ9BXJ7 453 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 SH2D4AQ9H788 454 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 N6AMT1Q9Y5N5 214 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 EIF4E1BA6NMX2 242 aaKnown RBP11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L15C9J2P7 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L13C9JLJ4 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L11C9JVI0 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L18D6R9N7 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L22D6RA61 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L17D6RBQ6 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L19D6RCP7 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L20D6RJB6 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 EPB41P11171 864 aaKnown RBP11.51□□□□□ -0.57
VPS18-201ENST00000220509 TM4SF1P30408 202 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L24Q0WX57 530 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 CEP85LQ5SZL2 805 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 ARL6IP4Q66PJ3 421 aaKnown RBP11.51□□□□□ -0.57
VPS18-201ENST00000220509 USP17L6PQ6QN14 398 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 MIGA2Q7L4E1 593 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 TMEM139Q8IV31 216 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 NEK9Q8TD19 979 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 CCDC113Q9H0I3 377 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 HSD3B7Q9H2F3 369 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 KANSL2Q9H9L4 492 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 MCM8Q9UJA3 840 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 TUBE1Q9UJT0 475 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 SMIM23A6NLE4 172 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 GAS7O60861 476 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 NTRK3Q16288 839 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 CCDC92Q53HC0 331 aaPredicted RBP11.51□□□□□ -0.57
VPS18-201ENST00000220509 FAM81AQ8TBF8 368 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 P2RX5Q93086 422 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
VPS18-201ENST00000220509 IFIH1Q9BYX4 1025 aaKnown RBP11.51□□□□□ -0.57
VPS18-201ENST00000220509 HOXA13P31271 388 aaPredicted RBP11.5□□□□□ -0.57
VPS18-201ENST00000220509 GRM4Q14833 912 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 SLC9C1Q4G0N8 1177 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 RASGRP2Q7LDG7 609 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 PI4KBQ9UBF8 816 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 SWAP70Q9UH65 585 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 HPCAL4Q9UM19 191 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 CCDC169A6NNP5 214 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 TMEM110-MUSTN1A8MSY1 372 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 LAD1O00515 517 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 ALAS1P13196 640 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 PRCPP42785 496 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 PSMC1P62191 440 aaKnown RBP11.5□□□□□ -0.57
VPS18-201ENST00000220509 GUCY1A3Q02108 690 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 PTPAQ15257 358 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 TMC4Q7Z404 712 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 SUPT20HQ8NEM7 779 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 CCDC51Q96ER9 411 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 RMDN2Q96LZ7 410 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 TCHPQ9BT92 498 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 RGL1Q9NZL6 768 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 EHD2Q9NZN4 543 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 BAIAP2L1Q9UHR4 511 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 ATP6V0A2Q9Y487 856 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 LRP6O75581 1613 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 NDUFA10O95299 355 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 SRGNP10124 158 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 CRKP46108 304 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 ATP2C1P98194 919 aaPredicted RBP11.5□□□□□ -0.57
VPS18-201ENST00000220509 KLHL30Q0D2K2 578 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 PPP4R3AQ6IN85 833 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.5□□□□□ -0.57
VPS18-201ENST00000220509 SP8Q8IXZ3 490 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 NEDD1Q8NHV4 660 aa11.5□□□□□ -0.57
VPS18-201ENST00000220509 GJA10Q969M2 543 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms