RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 WNK3Q9BYP7 1800 aa8.66□□□□□ -1.02
SCG3-201ENST00000220478 LAMB1P07942 1786 aa8.66□□□□□ -1.02
SCG3-201ENST00000220478 DPPA5A6NC42 116 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 F8VZ95 297 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ASAP2O43150 1006 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 PRKAB2O43741 272 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 SHBGP04278 402 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ATP4AP20648 1035 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 KLRC1P26715 233 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 DNAJA1P31689 397 aaKnown RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 KRT2P35908 639 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 GKAP1Q5VSY0 366 aaPredicted RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 CWF19L1Q69YN2 538 aaKnown RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 ARMC9Q7Z3E5 817 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 TBC1D1Q86TI0 1168 aaPredicted RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 ZNF654Q8IZM8 581 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 CCDC155Q8N6L0 562 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ZNF513Q8N8E2 541 aaPredicted RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 NAP1L4Q99733 375 aaKnown RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 PACSIN1Q9BY11 444 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 SEMA6BQ9H3T3 888 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 DISC1Q9NRI5 854 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 NKX1-2Q9UD57 310 aaPredicted RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 SHANK3Q9BYB0 1731 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 FAM205AQ6ZU69 1335 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 SPDYE3A6NKU9 549 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 AHCYL1O43865 530 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 RTN3O95197 1032 aaPredicted RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 NQO1P15559 274 aaKnown RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 MMP13P45452 471 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 RCAN1P53805 252 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 KCNMA1Q12791 1236 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 STK4Q13043 487 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ITIH4Q14624 930 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 TNFAIP8L3Q5GJ75 292 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ANKRD20A2Q5SQ80 823 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ODR4Q5SWX8 454 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 AKNAD1Q5T1N1 836 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ANKRD20A1Q5TYW2 823 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ANKRD20A3Q5VUR7 823 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 FOXB2Q5VYV0 432 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ANO7Q6IWH7 933 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 MAEAQ7L5Y9 396 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 DRAXINQ8NBI3 349 aaPredicted RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 KIAA0895Q8NCT3 520 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 NLRP3Q96P20 1036 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 YIPF3Q9GZM5 350 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 CCDC134Q9H6E4 229 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 ZMYND8Q9ULU4 1186 aaPredicted RBP8.65□□□□□ -1.02
SCG3-201ENST00000220478 COL4A1P02462 1669 aa8.65□□□□□ -1.02
SCG3-201ENST00000220478 M0R2N6 131 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 CAND2O75155 1236 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 CLTAP09496 248 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 FCER1AP12319 257 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 SCNN1AP37088 669 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 UBE4AQ14139 1066 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 MSL1Q68DK7 614 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 LRRC34Q8IZ02 419 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 CRAMP1Q96RY5 1269 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 ARHGEF3Q9NR81 526 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 RNF14Q9UBS8 474 aa8.65□□□□□ -1.03
SCG3-201ENST00000220478 SMAPO00193 183 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 UBOX5O94941 541 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 MYBL1P10243 752 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 CTNNA1P35221 906 aaKnown RBP8.64□□□□□ -1.03
SCG3-201ENST00000220478 RNASE9P60153 205 aaKnown RBP8.64□□□□□ -1.03
SCG3-201ENST00000220478 NAB2Q15742 525 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 ZNF746Q6NUN9 644 aaPredicted RBP8.64□□□□□ -1.03
SCG3-201ENST00000220478 PCGF5Q86SE9 256 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 RNF10Q8N5U6 811 aaKnown RBP8.64□□□□□ -1.03
SCG3-201ENST00000220478 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.64□□□□□ -1.03
SCG3-201ENST00000220478 BRINP2Q9C0B6 783 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 CAPN10Q9HC96 672 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 EID1Q9Y6B2 187 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 CNTNAP5Q8WYK1 1306 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 SLIT2O94813 1529 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 PRPF3O43395 683 aaKnown RBP8.64□□□□□ -1.03
SCG3-201ENST00000220478 SNRPA1P09661 255 aaKnown RBP8.64□□□□□ -1.03
SCG3-201ENST00000220478 PHKG2P15735 406 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 GM2AP17900 193 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 TNNI2P48788 182 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 SF3A3Q12874 501 aaKnown RBP eCLIP8.64□□□□□ -1.03
SCG3-201ENST00000220478 DPY19L2P1Q6NXN4 242 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 TRIM22Q8IYM9 498 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 LRRC57Q8N9N7 239 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 CCDC63Q8NA47 563 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 HPS3Q969F9 1004 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 TRIM47Q96LD4 638 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 TRIM33Q9UPN9 1127 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 SLC4A4Q9Y6R1 1079 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 KIAA1551Q9HCM1 1747 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 EIF4E1BA6NMX2 242 aaKnown RBP8.64□□□□□ -1.03
SCG3-201ENST00000220478 PLSCR1O15162 318 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 USO1O60763 962 aaKnown RBP8.64□□□□□ -1.03
SCG3-201ENST00000220478 ITGA4P13612 1032 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 CHN1P15882 459 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 PAFAH1B1P43034 410 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 MGAT5Q09328 741 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 SPA17Q15506 151 aa8.64□□□□□ -1.03
SCG3-201ENST00000220478 FAM133BQ5BKY9 247 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms