RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 EXOC3L4Q17RC7 722 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 NUGGCQ68CJ6 796 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 CCDC13Q8IYE1 715 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 NEK9Q8TD19 979 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 HAUS2Q9NVX0 235 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 ADCY7P51828 1080 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 OTUD6AQ7L8S5 288 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 BICD1Q96G01 975 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 EPN3Q9H201 632 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 KCNQ5Q9NR82 932 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 THAP12O43422 761 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 CHMP2AO43633 222 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 TM4SF1P30408 202 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 POLE2P56282 527 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 BIRC2Q13490 618 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 HOOK2Q96ED9 719 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 TRIM4Q9C037 500 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 PRPF3O43395 683 aaKnown RBP12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 EXOC3O60645 756 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 DDAH1O94760 285 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 HAUS3Q68CZ6 603 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 MS4A14Q96JA4 679 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 KRT5P13647 590 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 PPP2R2AP63151 447 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 DNM3Q9UQ16 869 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 PP2D1A8MPX8 630 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 BRD2P25440 801 aaKnown RBP12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 SP4Q02446 784 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 BIRC3Q13489 604 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 CUL1Q13616 776 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 LRRC47Q8N1G4 583 aaKnown RBP12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 CUEDC2Q9H467 287 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 YY1AP1Q9H869 796 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 VPS37BQ9H9H4 285 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 CAPN11Q9UMQ6 739 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 KCNV2Q8TDN2 545 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 GJA10Q969M2 543 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 LIMA1Q9UHB6 759 aaKnown RBP12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 TBK1Q9UHD2 729 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 IVNS1ABPQ9Y6Y0 642 aa12.53□□□□□ -0.4
DNMT3B-201ENST00000201963 H0Y3Z8 333 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 RASGRF2O14827 1237 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 SERPING1P05155 500 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 CARSP49589 748 aaKnown RBP12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 ERVK-24P63145 666 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 WDR93Q6P2C0 686 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 ALKBH5Q6P6C2 394 aaKnown RBP12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 GDAP1Q8TB36 358 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 PBKQ96KB5 322 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 PSMD1Q99460 953 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 STK36Q9NRP7 1315 aa12.52□□□□□ -0.4
DNMT3B-201ENST00000201963 BAG2O95816 211 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 NR2F2P24468 414 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 ADCY8P40145 1251 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 ANTXR2P58335 489 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 ARMC2Q8NEN0 867 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 ARL8AQ96BM9 186 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 DYNLL2Q96FJ2 89 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 SENP2Q9HC62 589 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 MLXIPLQ9NP71 852 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 USTQ9Y2C2 406 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 COL4A3BPQ9Y5P4 624 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 LTN1O94822 1766 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 CELF2O95319 508 aaKnown RBP12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 STAMBPO95630 424 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 SLC1A4P43007 532 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 RASA3Q14644 834 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 SPATA24Q86W54 205 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 MYCT1Q8N699 235 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 IL17RAQ96F46 866 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 ZMYND12Q9H0C1 365 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 DMGDHQ9UI17 866 aaKnown RBP12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 PCDHA4Q9UN74 947 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 SNX24Q9Y343 169 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 RFX7Q2KHR2 1363 aa12.52□□□□□ -0.41
DNMT3B-201ENST00000201963 DESP17661 470 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 EPHX2P34913 555 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 HUNKP57058 714 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 HDLBPQ00341 1268 aaKnown RBP12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 MESDQ14696 234 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 ARHGAP24Q8N264 748 aa12.51□□□□□ -0.41
DNMT3B-201ENST00000201963 OR2W6PQ8NHA6 318 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms