RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 SFR1Q86XK3 245 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 ZC3H3Q8IXZ2 948 aaKnown RBP20.6■□□□□ 0.89
CTSA-201ENST00000191018 CPLX3Q8WVH0 158 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 CDCA5Q96FF9 252 aa20.6■□□□□ 0.89
CTSA-201ENST00000191018 NAA15Q9BXJ9 866 aaKnown RBP20.6■□□□□ 0.89
CTSA-201ENST00000191018 ZC3H4Q9UPT8 1303 aaKnown RBP20.59■□□□□ 0.89
CTSA-201ENST00000191018 RSPH10B2B2RC85 870 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 DDX39AO00148 427 aaKnown RBP20.59■□□□□ 0.89
CTSA-201ENST00000191018 ZBTB39O15060 712 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 TPM1P09493 284 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 RSPH10BP0C881 870 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 PPATQ06203 517 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 NOC4LQ9BVI4 516 aaKnown RBP20.59■□□□□ 0.89
CTSA-201ENST00000191018 ZHX3Q9H4I2 956 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 A1CFQ9NQ94 594 aaKnown RBP20.59■□□□□ 0.89
CTSA-201ENST00000191018 OLFML3Q9NRN5 406 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 CYP39A1Q9NYL5 469 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 KCND2Q9NZV8 630 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 PKD2L1Q9P0L9 805 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 COL4A3BPQ9Y5P4 624 aa20.59■□□□□ 0.89
CTSA-201ENST00000191018 RNF225M0QZC1 329 aaPredicted RBP20.58■□□□□ 0.89
CTSA-201ENST00000191018 CCP110O43303 1012 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 P4HBP07237 508 aaKnown RBP20.58■□□□□ 0.89
CTSA-201ENST00000191018 NR3C2P08235 984 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 CCND2P30279 289 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 CASP5P51878 434 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 PTPN14Q15678 1187 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 LBX2Q6XYB7 198 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 ANKRD13AQ8IZ07 590 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 CEP63Q96MT8 703 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 ERGIC2Q96RQ1 377 aa20.58■□□□□ 0.89
CTSA-201ENST00000191018 A0A0G2JLL6 359 aaPredicted RBP20.58■□□□□ 0.88
CTSA-201ENST00000191018 GAP43P17677 238 aa20.58■□□□□ 0.88
CTSA-201ENST00000191018 TBC1D8BQ0IIM8 1120 aa20.58■□□□□ 0.88
CTSA-201ENST00000191018 BMT2Q1RMZ1 405 aa20.58■□□□□ 0.88
CTSA-201ENST00000191018 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.88
CTSA-201ENST00000191018 PRRT2Q7Z6L0 340 aaPredicted RBP20.58■□□□□ 0.88
CTSA-201ENST00000191018 NELFCDQ8IXH7 590 aa20.58■□□□□ 0.88
CTSA-201ENST00000191018 PROCA1Q8NCQ7 364 aaPredicted RBP20.58■□□□□ 0.88
CTSA-201ENST00000191018 BANK1Q8NDB2 785 aa20.58■□□□□ 0.88
CTSA-201ENST00000191018 NSUN6Q8TEA1 469 aaKnown RBP20.58■□□□□ 0.88
CTSA-201ENST00000191018 WDR81Q562E7 1941 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 MYH11P35749 1972 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 IRF6O14896 467 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 ATP9AO75110 1047 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 TBCAO75347 108 aaKnown RBP20.57■□□□□ 0.88
CTSA-201ENST00000191018 NF2P35240 595 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 MAN2A1Q16706 1144 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 EDRF1Q3B7T1 1238 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 ERO1BQ86YB8 467 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 GPRASP2Q96D09 838 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 INPP4AQ96PE3 977 aaPredicted RBP20.57■□□□□ 0.88
CTSA-201ENST00000191018 ELP3Q9H9T3 547 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 ABHD10Q9NUJ1 306 aa20.57■□□□□ 0.88
CTSA-201ENST00000191018 GLTPD2A6NH11 291 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 SPDYE5A6NIY4 337 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 TRAF5O00463 557 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 PES1O00541 588 aaKnown RBP20.56■□□□□ 0.88
CTSA-201ENST00000191018 MAFGO15525 162 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 LYPLA2O95372 231 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 HOXD13P35453 343 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 ZNF131P52739 623 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 MARSP56192 900 aaKnown RBP20.56■□□□□ 0.88
CTSA-201ENST00000191018 VWA3BQ502W6 1294 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 CHST13Q8NET6 341 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 TTYH3Q9C0H2 523 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 ZSWIM4Q9H7M6 989 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 TRAF3IP3Q9Y228 551 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 TESPA1A2RU30 521 aaPredicted RBP20.56■□□□□ 0.88
CTSA-201ENST00000191018 CXCL11O14625 94 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 PLS1Q14651 629 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 REXO1L1PQ8IX06 675 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 RETREG2Q8NC44 543 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 CLMNQ96JQ2 1002 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 NDST4Q9H3R1 872 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 BCAS3Q9H6U6 928 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 ODF2LQ9ULJ1 636 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 CAPN11Q9UMQ6 739 aa20.56■□□□□ 0.88
CTSA-201ENST00000191018 TTC26A0AVF1 554 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 RASSF10A6NK89 507 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 KIF2AO00139 706 aaPredicted RBP20.55■□□□□ 0.88
CTSA-201ENST00000191018 MYBP10242 640 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 GUCY2CP25092 1073 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 KRT9P35527 623 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 SYCP1Q15431 976 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 KNOP1Q1ED39 458 aaKnown RBP20.55■□□□□ 0.88
CTSA-201ENST00000191018 FIGNQ5HY92 759 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 OTUD5Q96G74 571 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 NUP58Q9BVL2 599 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 DBR1Q9UK59 544 aaKnown RBP20.55■□□□□ 0.88
CTSA-201ENST00000191018 KCNH4Q9UQ05 1017 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 PPP2R2CQ9Y2T4 447 aa20.55■□□□□ 0.88
CTSA-201ENST00000191018 ZSCAN12O43309 604 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 RGS20O76081 388 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 FAM13AO94988 1023 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 GNA14O95837 355 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 QARSP47897 775 aaKnown RBP20.54■□□□□ 0.88
CTSA-201ENST00000191018 KRT76Q01546 638 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 TOGARAM2Q6ZUX3 1019 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 MOB2Q70IA6 237 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms