RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 CUL4BQ13620 913 aa24.56■■□□□ 1.52
HOXC8-201ENST00000040584 MCM6Q14566 821 aa24.56■■□□□ 1.52
HOXC8-201ENST00000040584 ISM2Q6H9L7 571 aa24.56■■□□□ 1.52
HOXC8-201ENST00000040584 NPLOC4Q8TAT6 608 aa24.56■■□□□ 1.52
HOXC8-201ENST00000040584 LARP4BQ92615 738 aaKnown RBP24.56■■□□□ 1.52
HOXC8-201ENST00000040584 SMARCE1Q969G3 411 aa24.56■■□□□ 1.52
HOXC8-201ENST00000040584 SAMM50Q9Y512 469 aa24.56■■□□□ 1.52
HOXC8-201ENST00000040584 DOCK3Q8IZD9 2030 aa24.56■■□□□ 1.52
HOXC8-201ENST00000040584 NFASCO94856 1347 aa24.56■■□□□ 1.52
HOXC8-201ENST00000040584 E9PMD0 336 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 KRT76Q01546 638 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 LRMPQ12912 555 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 ZNF467Q7Z7K2 595 aaPredicted RBP24.55■■□□□ 1.52
HOXC8-201ENST00000040584 TPH2Q8IWU9 490 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 MAML3Q96JK9 1138 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 TUFT1Q9NNX1 390 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 GTPBP6O43824 516 aaPredicted RBP24.55■■□□□ 1.52
HOXC8-201ENST00000040584 SMC2O95347 1197 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 TBC1D8O95759 1140 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 CTGFP29279 349 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 PSMC6P62333 389 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 CCDC144BQ3MJ40 725 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 JPH1Q9HDC5 661 aaPredicted RBP24.55■■□□□ 1.52
HOXC8-201ENST00000040584 TCEAL9Q9UHQ7 104 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 DIS3Q9Y2L1 958 aaKnown RBP24.55■■□□□ 1.52
HOXC8-201ENST00000040584 TELO2Q9Y4R8 837 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 PCNTO95613 3336 aa24.55■■□□□ 1.52
HOXC8-201ENST00000040584 MYL1P05976 194 aa24.54■■□□□ 1.52
HOXC8-201ENST00000040584 UBA1P22314 1058 aaKnown RBP24.54■■□□□ 1.52
HOXC8-201ENST00000040584 SP4Q02446 784 aa24.54■■□□□ 1.52
HOXC8-201ENST00000040584 MAP2K5Q13163 448 aa24.54■■□□□ 1.52
HOXC8-201ENST00000040584 SV2BQ7L1I2 683 aa24.54■■□□□ 1.52
HOXC8-201ENST00000040584 CYFIP1Q7L576 1253 aa24.54■■□□□ 1.52
HOXC8-201ENST00000040584 BANK1Q8NDB2 785 aa24.54■■□□□ 1.52
HOXC8-201ENST00000040584 SENP7Q9BQF6 1050 aa24.54■■□□□ 1.52
HOXC8-201ENST00000040584 DOCK5Q9H7D0 1870 aa24.54■■□□□ 1.52
HOXC8-201ENST00000040584 TNPO2O14787 897 aaKnown RBP24.53■■□□□ 1.52
HOXC8-201ENST00000040584 MAP2K2P36507 400 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 SYCP1Q15431 976 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 TPD52L1Q16890 204 aaPredicted RBP24.53■■□□□ 1.52
HOXC8-201ENST00000040584 DPCR1Q3MIW9 517 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 ZNF746Q6NUN9 644 aaPredicted RBP24.53■■□□□ 1.52
HOXC8-201ENST00000040584 WRAP73Q9P2S5 460 aaPredicted RBP24.53■■□□□ 1.52
HOXC8-201ENST00000040584 SLC9A2Q9UBY0 812 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 MAN1B1Q9UKM7 699 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 WDR64B1ANS9 1081 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 NRDCO43847 1150 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 ARIH2O95376 493 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 TGFB3P10600 412 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 LY6KQ17RY6 165 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 MAMDC4Q6UXC1 1216 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 GSDMAQ96QA5 445 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 PDGFCQ9NRA1 345 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.53■■□□□ 1.52
HOXC8-201ENST00000040584 SLC5A4Q9NY91 659 aa24.53■■□□□ 1.52
HOXC8-201ENST00000040584 ZNF236Q9UL36 1845 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 TNNT1P13805 278 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 BMP6P22004 513 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 SFNP31947 248 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 JAK3P52333 1124 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 TRIML1Q8N9V2 468 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 LXNQ9BS40 222 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 ARHGAP39Q9C0H5 1083 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 DDX41Q9UJV9 622 aaKnown RBP24.52■■□□□ 1.52
HOXC8-201ENST00000040584 DNM3Q9UQ16 869 aa24.52■■□□□ 1.52
HOXC8-201ENST00000040584 CTIFO43310 598 aaKnown RBP24.51■■□□□ 1.51
HOXC8-201ENST00000040584 TRPA1O75762 1119 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 SNAI1O95863 264 aaPredicted RBP24.51■■□□□ 1.51
HOXC8-201ENST00000040584 SSBP05455 408 aaKnown RBP eCLIP24.51■■□□□ 1.51
HOXC8-201ENST00000040584 PLA2G4BP0C869 781 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 SKILP12757 684 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 CCDC150Q8NCX0 1101 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 USP6NLQ92738 828 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 TINF2Q9BSI4 451 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 GJD2Q9UKL4 321 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 KIF2AO00139 706 aaPredicted RBP24.51■■□□□ 1.51
HOXC8-201ENST00000040584 RIOK3O14730 519 aaKnown RBP24.51■■□□□ 1.51
HOXC8-201ENST00000040584 P4HBP07237 508 aaKnown RBP24.51■■□□□ 1.51
HOXC8-201ENST00000040584 AMPD3Q01432 767 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 MORC3Q14149 939 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 NEK9Q8TD19 979 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 PIGOQ8TEQ8 1089 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 TRIM9Q9C026 710 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 RNF186Q9NXI6 227 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 PCDHA10Q9Y5I2 948 aa24.51■■□□□ 1.51
HOXC8-201ENST00000040584 MYMKA6NI61 221 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 ZBTB39O15060 712 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 CYP2B6P20813 491 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 PSMC4P43686 418 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 ACTR2P61160 394 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 LACTBP83111 547 aaPredicted RBP24.5■■□□□ 1.51
HOXC8-201ENST00000040584 NEDD9Q14511 834 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 TMEM63BQ5T3F8 832 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 KCNV1Q6PIU1 500 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 KCTD17Q8N5Z5 321 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 C7orf25Q9BPX7 421 aa24.5■■□□□ 1.51
HOXC8-201ENST00000040584 FARP2O94887 1054 aaPredicted RBP24.49■■□□□ 1.51
HOXC8-201ENST00000040584 GGPS1O95749 300 aa24.49■■□□□ 1.51
HOXC8-201ENST00000040584 TUBB4AP04350 444 aa24.49■■□□□ 1.51
HOXC8-201ENST00000040584 HOXC6P09630 235 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms