RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 UBLCP1Q8WVY7 318 aaPredicted RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 CD209Q9NNX6 404 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 LUC7LQ9NQ29 371 aaKnown RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 HDAC9Q9UKV0 1011 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 GPR75-ASB3A0A0A6YYF3 556 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 DAPK3O43293 454 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 MED24O75448 989 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 CYP11B2P19099 503 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 HSPA9P38646 679 aaKnown RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 TCERG1LQ5VWI1 586 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 ZNF804AQ7Z570 1209 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 CCDC65Q8IXS2 484 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 DPH5Q9H2P9 285 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 TMEM59LQ9UK28 342 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 FBXL5Q9UKA1 691 aa15.37■□□□□ 0.05
USH1C-201ENST00000005226 RTCBQ9Y3I0 505 aaKnown RBP15.37■□□□□ 0.05
USH1C-201ENST00000005226 MYBP10242 640 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 CTNNA1P35221 906 aaKnown RBP15.36■□□□□ 0.05
USH1C-201ENST00000005226 COPB2P35606 906 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 SNAP25P60880 206 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 IRX3P78415 501 aaPredicted RBP15.36■□□□□ 0.05
USH1C-201ENST00000005226 QPCTQ16769 361 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 MFSD14BQ5SR56 506 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 CD302Q8IX05 232 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 CEP63Q96MT8 703 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 NUCKS1Q9H1E3 243 aaKnown RBP15.36■□□□□ 0.05
USH1C-201ENST00000005226 ISCUQ9H1K1 167 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 CNOT8Q9UFF9 292 aaKnown RBP15.36■□□□□ 0.05
USH1C-201ENST00000005226 H0YGN5 161 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 ATP2C2O75185 946 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 UFL1O94874 794 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 UCHL3P15374 230 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 ZNF844Q08AG5 666 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 SPRED3Q2MJR0 410 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 ODF2Q5BJF6 829 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 DPY19L2P1Q6NXN4 242 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 ALKBH5Q6P6C2 394 aaKnown RBP15.36■□□□□ 0.05
USH1C-201ENST00000005226 SCFD2Q8WU76 684 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 LRRC27Q9C0I9 530 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 NAGPAQ9UK23 515 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 NR2E1Q9Y466 385 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 NFS1Q9Y697 457 aa15.36■□□□□ 0.05
USH1C-201ENST00000005226 KRIT1O00522 736 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 CETN3O15182 167 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 CLIC2O15247 247 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 TAL1P17542 331 aaPredicted RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 RFC4P35249 363 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 CASP4P49662 377 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 PABPC4Q13310 644 aaKnown RBP eCLIP15.35■□□□□ 0.05
USH1C-201ENST00000005226 SF3B2Q13435 895 aaKnown RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 DDX60LQ5H9U9 1706 aaKnown RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 CNPY4Q8N129 248 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 ARHGEF1Q92888 912 aaKnown RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 PSTPIP2Q9H939 334 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 CD248Q9HCU0 757 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 NOC2LQ9Y3T9 749 aaKnown RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 LOC102724159A0A0B4J2E5 919 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 TTI1O43156 1089 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 MYZAPP0CAP1 466 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 HOXD13P35453 343 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 USP11P51784 963 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 KCNA1Q09470 495 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 PWP2Q15269 919 aaKnown RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 FAM98CQ17RN3 349 aaKnown RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 PPP4R3AQ6IN85 833 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 SLC30A10Q6XR72 485 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 LRRC57Q8N9N7 239 aa15.35■□□□□ 0.05
USH1C-201ENST00000005226 PRPF38AQ8NAV1 312 aaKnown RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 NOVA2Q9UNW9 492 aaKnown RBP15.35■□□□□ 0.05
USH1C-201ENST00000005226 PNMA6FA0A0J9YX94 578 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 GOLGA6L10A6NI86 522 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 SFI1A8K8P3 1242 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 RSPH10B2B2RC85 870 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 HMGB1P1B2RPK0 211 aaPredicted RBP15.34■□□□□ 0.05
USH1C-201ENST00000005226 RSPH10BP0C881 870 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 PON1P27169 355 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 ORC2Q13416 577 aaPredicted RBP15.34■□□□□ 0.05
USH1C-201ENST00000005226 SHROOM1Q2M3G4 852 aaPredicted RBP15.34■□□□□ 0.05
USH1C-201ENST00000005226 CDCA7Q9BWT1 371 aaPredicted RBP15.34■□□□□ 0.05
USH1C-201ENST00000005226 PLCB1Q9NQ66 1216 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 LEMD3Q9Y2U8 911 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
USH1C-201ENST00000005226 MPHOSPH10O00566 681 aaKnown RBP15.34■□□□□ 0.05
USH1C-201ENST00000005226 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 GRAPQ13588 217 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 TPCN2Q8NHX9 752 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 GRAPLQ8TC17 118 aaPredicted RBP15.34■□□□□ 0.05
USH1C-201ENST00000005226 U2AF1L4Q8WU68 220 aaKnown RBP15.34■□□□□ 0.05
USH1C-201ENST00000005226 CYFIP2Q96F07 1278 aa15.34■□□□□ 0.05
USH1C-201ENST00000005226 MYH4Q9Y623 1939 aa15.33■□□□□ 0.05
USH1C-201ENST00000005226 AKAP3O75969 853 aa15.33■□□□□ 0.05
USH1C-201ENST00000005226 CLK2P49760 499 aaKnown RBP15.33■□□□□ 0.05
USH1C-201ENST00000005226 PEX26Q7Z412 305 aa15.33■□□□□ 0.05
USH1C-201ENST00000005226 SFR1Q86XK3 245 aa15.33■□□□□ 0.05
USH1C-201ENST00000005226 MDM1Q8TC05 714 aa15.33■□□□□ 0.05
USH1C-201ENST00000005226 CUL5Q93034 780 aa15.33■□□□□ 0.05
USH1C-201ENST00000005226 TRIM51Q9BSJ1 452 aa15.33■□□□□ 0.05
USH1C-201ENST00000005226 DDX4Q9NQI0 724 aaKnown RBP15.33■□□□□ 0.05
USH1C-201ENST00000005226 ARMCX3Q9UH62 379 aaPredicted RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms