RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 SYNJ2BP-COX16A0A087WUM0 186 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 MYO1FO00160 1098 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 CLCN1P35523 988 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 GEN1Q17RS7 908 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 ZNF579Q8NAF0 562 aaKnown RBP11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 URGCPQ8TCY9 931 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 ATRIPQ8WXE1 791 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 EEF2KMTQ96G04 330 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 DYDC2Q96IM9 177 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 PSMB7Q99436 277 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 COX16Q9P0S2 106 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 COL5A2P05997 1499 aaPredicted RBP11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 POTEMA6NI47 508 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 SRGNP10124 158 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 TSGA10IPQ3SY00 556 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 UNC13DQ70J99 1090 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 THNSL1Q8IYQ7 743 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 SMYD4Q8IYR2 804 aaPredicted RBP11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 GRAMD1CQ8IYS0 662 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 KRT222Q8N1A0 295 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 NME8Q8N427 588 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 GCOM2Q9BZD3 368 aaPredicted RBP11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 ALDH8A1Q9H2A2 487 aaPredicted RBP11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 HAUS4Q9H6D7 363 aa11.26□□□□□ -0.61
NIPAL3-201ENST00000003912 TXNP10599 105 aaKnown RBP11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 ITKQ08881 620 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 ERO1AQ96HE7 468 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 TMEM39BQ9GZU3 492 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 BFSP1Q12934 665 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 HDXQ7Z353 690 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 SIX6OS1Q8N1H7 587 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 THEM5Q8N1Q8 247 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 RPGRIP1Q96KN7 1286 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 GCNT4Q9P109 453 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 SLC9A2Q9UBY0 812 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 CDC27P30260 824 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 ECE1P42892 770 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 SLC12A2P55011 1212 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 INTS8Q75QN2 995 aaKnown RBP11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 SMC6Q96SB8 1091 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 PCDHA10Q9Y5I2 948 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 IFNB1P01574 187 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 IQGAP1P46940 1657 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 RFX5P48382 616 aaPredicted RBP11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 PAK2Q13177 524 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 HYOU1Q9Y4L1 999 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 SAR1BQ9Y6B6 198 aa11.25□□□□□ -0.61
NIPAL3-201ENST00000003912 KBTBD13C9JR72 458 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 KCNK3O14649 394 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 PFDN6O15212 129 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 MAP7D1Q3KQU3 841 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 CEP55Q53EZ4 464 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 BSPRYQ5W0U4 402 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 GPRC5AQ8NFJ5 357 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 GPT2Q8TD30 523 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 RAD54LQ92698 747 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 UBE2TQ9NPD8 197 aaPredicted RBP11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 ZBBXA8MT70 800 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 GTF2A2P52657 109 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 ZNF568Q3ZCX4 644 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 ZNF667Q5HYK9 610 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 PRAMEF18Q5VWM3 479 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 RESP18Q5W5W9 173 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 STAG2Q8N3U4 1231 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 AFAP1L2Q8N4X5 818 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 FBF1Q8TES7 1133 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 PFASO15067 1338 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 PLSCR1O15162 318 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 SH3BP5O60239 455 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 PPP4CP60510 307 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 RHPN2Q8IUC4 686 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 SCYL3Q8IZE3 742 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 ENOX1Q8TC92 643 aaKnown RBP11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 KATNAL1Q9BW62 490 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 SEL1LQ9UBV2 794 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 FAM170AA1A519 330 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 GOLGA8IPA6NC78 632 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 GOLGA8JA6NMD2 632 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 SFI1A8K8P3 1242 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 CUL4BQ13620 913 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 HEXIM2Q96MH2 286 aaKnown RBP11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 MRPL47Q9HD33 250 aaKnown RBP11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 INPP5FQ9Y2H2 1132 aa11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 EPN1Q9Y6I3 576 aaPredicted RBP11.24□□□□□ -0.61
NIPAL3-201ENST00000003912 COBLO75128 1261 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 CSPG5O95196 566 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 EPHX2P34913 555 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 CDC42EP1Q00587 391 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 EPHA7Q15375 998 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 DPCR1Q3MIW9 517 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 BEST2Q8NFU1 509 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 RNF139Q8WU17 664 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms