RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Ddx25Q9QY15 484 aa23.32■■□□□ 1.32
Trim27-207ENSMUST00000223065 NeblQ0II04 452 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Ogfod1Q3U0K8 545 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Map3k9Q3U1V8 1077 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Epha7Q61772 998 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 GartQ64737 1010 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Tmem132dQ76HP3 1097 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Ccdc93Q7TQK5 629 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Cyp26b1Q811W2 512 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Erp44Q9D1Q6 406 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Q9D5Q8 446 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Cabp5Q9JLK3 173 aa23.31■■□□□ 1.32
Trim27-207ENSMUST00000223065 Gm4907B1AXB9 411 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Pafah1b1P63005 410 aaKnown RBP23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Zc3h18Q0P678 948 aaKnown RBP23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 ItpripQ3TNL8 555 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Map9Q3TRR0 646 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Pbxip1Q3TVI8 727 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 NntQ61941 1086 aaKnown RBP23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 1700020D05RikQ99PB1 294 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 ErmardE9Q048 622 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Pagr1bF6V0H0 108 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Erbb2P70424 1256 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Rit2P70425 217 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 NfibP97863 570 aaKnown RBP23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Tcerg1lQ3B807 590 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Irak1Q62406 710 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Gpr180Q8BPS4 441 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Shtn1Q8K2Q9 631 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Pcdhgc5Q91XW9 944 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 EpgnQ924X1 152 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Med24Q99K74 987 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Card14Q99KF0 999 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Pagr1aQ99L02 253 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Arhgef7Q9ES28 862 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Fem1bQ9Z2G0 627 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 XdhQ00519 1335 aa23.3■■□□□ 1.32
Trim27-207ENSMUST00000223065 Rpl13P47963 211 aaKnown RBP23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 Tmprss11eQ5S248 423 aa23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 Znf428Q8C1M2 176 aa23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 Fam20aQ8CID3 541 aa23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 Enox2Q8R0Z2 598 aa23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 Ppp1r3aQ99MR9 1089 aa23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 Mrps5Q99N87 432 aaKnown RBP23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 PdhbQ9D051 359 aa23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 Nol7Q9D7Z3 254 aaKnown RBP23.29■■□□□ 1.32
Trim27-207ENSMUST00000223065 Nck2O55033 380 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Rps12P63323 132 aaKnown RBP23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Ccdc84Q4VA36 332 aaKnown RBP23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Gm11437Q5QR91 290 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Cacna2d4Q5RJF7 1116 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Atp1a2Q6PIE5 1020 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Spdl1Q923A2 608 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 A0A286YCQ6 122 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Eif3dO70194 548 aaKnown RBP23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Stat4P42228 749 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Hoxc13P50207 328 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Actn4P57780 912 aaKnown RBP23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 LbrQ3U9G9 626 aaKnown RBP23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Tfcp2l1Q3UNW5 479 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Ttc7aQ8BGB2 858 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Zswim4Q8C7B8 1101 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Bcas3Q8CCN5 928 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Lonp2Q9DBN5 852 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Kcnh7Q9ER47 1195 aa23.28■■□□□ 1.32
Trim27-207ENSMUST00000223065 Glt1d1A4FUP9 346 aa23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Mmp15O54732 657 aa23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Nmt1O70310 496 aaKnown RBP23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Fgfr4Q03142 799 aa23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Antxr2Q6DFX2 487 aa23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Map3k11Q80XI6 850 aa23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Lman1lQ8VCD3 505 aa23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Srgap2Q91Z67 1071 aa23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Mzb1Q9D8I1 188 aa23.27■■□□□ 1.32
Trim27-207ENSMUST00000223065 Cntnap5cQ0V8T7 1305 aa23.27■■□□□ 1.31
Trim27-207ENSMUST00000223065 Calcoco2A2A6M5 331 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Ccdc78D3Z5T1 437 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Idh1O88844 414 aaKnown RBP23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 P4hbP09103 509 aaKnown RBP23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Kcna3P16390 528 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Tfe3Q64092 572 aaKnown RBP23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Hook2Q7TMK6 716 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Camkk2Q8C078 588 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Ulbp1Q8HWA3 334 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 AdarQ99MU3 1178 aaKnown RBP23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Ppil2Q9D787 521 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Nfxl1E9Q8I7 918 aaKnown RBP23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Itgb5O70309 798 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 ThbdP15306 577 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Top1Q04750 767 aaKnown RBP23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Vwa3aQ3UVV9 1148 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Fdxacb1Q3UY23 622 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Ccpg1Q640L3 753 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Wdr3Q8BHB4 942 aaKnown RBP23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Nipa1Q8BHK1 323 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Bicdl2Q8CHW5 507 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 CbsQ91WT9 561 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Serpinb3bQ9D1Q5 387 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Trp53inp1Q9QXE4 239 aa23.26■■□□□ 1.31
Trim27-207ENSMUST00000223065 Smchd1Q6P5D8 2007 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms