RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 IdeQ9JHR7 1019 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ddx3yQ62095 658 aaKnown RBP9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Agr3Q8R3W7 165 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Nsmce1Q9D720 266 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Dnajc7Q9QYI3 494 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Smad1P70340 465 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Krt86P97861 486 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gngt2Q61017 69 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 NemfQ8CCP0 1064 aaKnown RBP9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tma7Q8K003 64 aaKnown RBP9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ttll1Q91V51 423 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tc2nQ91XT6 489 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Bbs5Q9CZQ9 341 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Sgpp1Q9JI99 430 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Dip2bQ3UH60 1574 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Mkl2P59759 1080 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 SkiQ60698 725 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Actr5Q80US4 605 aaKnown RBP9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cep104Q80V31 926 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ppp1r12bQ8BG95 976 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cnot10Q8BH15 744 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cdk8Q8R3L8 464 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Spef2Q8C9J3 1734 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 1700016G14RikA0A286YCZ6 238 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ugt1a8D3Z748 530 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ugt1a10E9PXN7 530 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Mroh8E9PYI4 1049 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Sash1P59808 1230 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 EnahQ03173 802 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Trim43aQ3TL54 445 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Dpcr1Q3TNW5 500 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Itih3Q61704 889 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tmem59lQ7TNI2 337 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Abi1Q8CBW3 481 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 FlcnQ8QZS3 579 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 CrebzfQ91ZR3 358 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 H2-OaQ9QWV1 250 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ubxn8Q9QZ49 277 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Stag2O35638 1231 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 RaraP11416 462 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gna14P30677 355 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ric8aQ3TIR3 530 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Arhgef16Q3U5C8 713 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Usp32F8VPZ3 1604 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm45194A0A140LJG2 572 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm5814J3QP80 125 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Wdr36Q3TAQ9 899 aaKnown RBP9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Zbtb17Q60821 794 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Avpr1aQ62463 423 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Bpifb6Q8BU51 449 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Myom1Q62234 1667 aaKnown RBP9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Nid2O88322 1403 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm5936A2BG95 728 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm5640A3KG49 728 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Calb1P12658 261 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tfcp2l1Q3UNW5 479 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Pfdn4Q3UWL8 134 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tlr11Q6R5P0 926 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Rimbp2Q80U40 1072 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Srp68Q8BMA6 625 aaKnown RBP9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Mtmr6Q8VE11 617 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ndc80Q9D0F1 642 aaKnown RBP9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 TbcbQ9D1E6 244 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Pcdha4O88689 947 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 LtbrP50284 415 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Stmn1P54227 149 aaKnown RBP9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ksr1Q61097 873 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Hoxa13Q62424 386 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 PigsQ6PD26 555 aaKnown RBP9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Osbpl2Q8BX94 484 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Champ1Q8K327 802 aaKnown RBP9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Slc24a3Q99PD7 645 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Peg12Q9WVA7 283 aa9.94□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Abca8aQ8K442 1620 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ttc13A0A1L1SSC7 844 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm7168A0AUV4 508 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gucy2eP52785 1108 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Znf652Q5DU09 608 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Diaph3Q9Z207 1171 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cdhr2E9Q7P9 1308 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ccdc175E9PVB3 822 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Acot6Q32Q92 419 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Rgl1Q60695 768 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Git1Q68FF6 770 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Q91WD4 421 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 PdhbQ9D051 359 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ccdc182Q9D9C6 152 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ddx25Q9QY15 484 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tex21Q9R0U9 575 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 TxkP42682 527 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm5168Q4KL04 211 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ccna1Q61456 421 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Acad11Q80XL6 779 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Spice1Q8C804 860 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Myef2Q8C854 591 aaKnown RBP9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gimap4Q99JY3 219 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Q9DAQ4 598 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Lbhd1A0A087WPA0 259 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm7356A0A087WSA6 508 aa9.93□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Timm44O35857 452 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms