RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Naip7Q9JIB3 1402 aa9.98□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Naip6Q9JIB6 1403 aa9.98□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Slc4a1P04919 929 aa9.98□□□□□ -0.81
Col6a5-201ENSMUST00000165165 MybP06876 636 aa9.98□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ap1m1P35585 423 aa9.98□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Slc8a2Q8K596 921 aa9.98□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Tex21Q9R0U9 575 aa9.98□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Frmpd1A2AKB4 1549 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Fosl2P47930 326 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Vmn1r199Q8R280 367 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Chordc1Q9D1P4 331 aaKnown RBP9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ppp1r2Q9DCL8 206 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Pex3Q9QXY9 372 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ttc13A0A1L1SSC7 844 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ccdc144bE9PVZ3 520 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Pde4aO89084 844 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ccdc69Q3TCJ8 202 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Asic4Q7TNS7 539 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Liat1Q810M6 228 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Phf20l1Q8CCJ9 1013 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ces1fQ91WU0 561 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 AacsQ9D2R0 672 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 3830403N18RikQ9D6C3 208 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 PtprkP35822 1457 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Pde6aP27664 859 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ephb4P54761 987 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Fam160a1Q505K2 1081 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Myo1dQ5SYD0 1006 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 RimklbQ80WS1 387 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Impg2Q80XH2 1243 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Rpa3Q9CQ71 121 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 NkapQ9D0F4 415 aaKnown RBP9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Abcb6Q9DC29 842 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Sgo2bJ3QMK1 1167 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Gm7942L7N277 499 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 NfibP97863 570 aaKnown RBP9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Atp8a2P98200 1148 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Tfdp1Q08639 410 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Foxred2Q3USW5 665 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Afap1l1Q8BZI0 768 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Sh3bp5lQ99LH9 392 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Grtp1Q9D3N8 359 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ccdc130Q9D516 385 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Dgcr8Q9EQM6 773 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Trim54Q9ERP3 366 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Angptl2Q9R045 493 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Arhgef12Q8R4H2 1543 aaKnown RBP9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Prl3d2F6R3P9 224 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Gm44G3UW88 330 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Heatr9Q5QNV8 569 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Rad17Q6NXW6 688 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 H2afy2Q8CCK0 372 aaKnown RBP9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Gid8Q9D7M1 228 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Fam135bQ9DAI6 1403 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Gm15262A0A140LIQ5 728 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 CtcflA2APF3 636 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Gm6882J3KMT3 313 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Serpinb8O08800 374 aaKnown RBP9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Tlr7P58681 1050 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Zfp51Q3U4L8 781 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Gm10662Q3UT86 313 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Islr2Q5RKR3 745 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Znf532Q6NXK2 1036 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Gps1Q99LD4 471 aaKnown RBP9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Shcbp1Q9Z179 668 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Peg3Q3URU2 1571 aa9.97□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Il2P04351 169 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Eya3P97480 510 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Stambpl1Q76N33 436 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Trpa1Q8BLA8 1125 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Galnt5Q8C102 930 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Champ1Q8K327 802 aaKnown RBP9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 GatbQ99JT1 557 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Trim33Q99PP7 1142 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Tfap4Q9JIZ5 338 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Nlrp5Q9R1M5 1163 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Stk25Q9Z2W1 426 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Tex28B1AYN9 409 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Fam169aQ5XG69 665 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Cgref1Q8R1U2 281 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Hip1Q8VD75 1029 aaKnown RBP9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Rbm42Q91V81 474 aaKnown RBP9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Rad51ap2G3UW63 976 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Krt76Q3UV17 594 aaKnown RBP9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Rhpn1Q61085 643 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Vmn1r213Q8R278 384 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Myh6Q02566 1938 aaKnown RBP9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Plekha5E9Q6H8 1269 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Adcy7P51829 1099 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Lrrc8eQ66JT1 795 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Eif2s1Q6ZWX6 315 aaKnown RBP9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 DpydQ8CHR6 1025 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ifi30Q9ESY9 248 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Apobec2Q9WV35 224 aa9.96□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Atp2c2A7L9Z8 944 aa9.96□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Msr1P30204 458 aaKnown RBP9.96□□□□□ -0.82
Col6a5-201ENSMUST00000165165 SftpbP50405 377 aa9.96□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ifit1Q64282 463 aa9.96□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ephx4Q6IE26 359 aa9.96□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Tmem132eQ6IEE6 982 aa9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms