RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Enox2Q8R0Z2 598 aa28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Serpina10Q8R121 448 aa28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Adcy3Q8VHH7 1145 aa28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Rhobtb2Q91V93 728 aa28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Grin3bQ91ZU9 1003 aa28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Ccdc89Q9DA73 370 aa28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Ngly1Q9JI78 651 aa28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Add1Q9QYC0 735 aaKnown RBP28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Dnajc7Q9QYI3 494 aa28.43■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Cetn3O35648 167 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Eif3dO70194 548 aaKnown RBP28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Fgfr4Q03142 799 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Cep126Q0VBV7 1103 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Ankrd24Q80VM7 985 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Dclk3Q8BWQ5 790 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Mipol1Q9D9F8 279 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Pex11aQ9Z211 246 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Ttc38A3KMP2 465 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Adamts10P58459 1104 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Otud5Q3U2S4 566 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Slc9b1Q8C0X2 565 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Desi2Q9D291 194 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 S1pr4Q9Z0L1 386 aa28.42■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Sec14l1A8Y5H7 715 aa28.41■■■□□ 2.14
Tpm1-216ENSMUST00000113707 P4hbP09103 509 aaKnown RBP28.41■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Pola2P33611 600 aa28.41■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Atp11aP98197 1187 aa28.41■■■□□ 2.14
Tpm1-216ENSMUST00000113707 EregQ61521 162 aa28.41■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Otud6bQ8K2H2 294 aa28.41■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Rbm42Q91V81 474 aaKnown RBP28.41■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Ears2Q9CXJ1 523 aa28.41■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Gm45140A0A0N4SUM8 220 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 ByslO54825 436 aaKnown RBP28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Lig1P37913 916 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Fam183bQ5NC57 135 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Pank4Q80YV4 820 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Dhx32Q8BZS9 744 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Grpel1Q99LP6 217 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Tmod4Q9JLH8 345 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Lamp1P11438 406 aaKnown RBP28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Msantd2Q6NZR2 559 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Trpv1Q704Y3 839 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Epn1Q80VP1 575 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Etf1Q8BWY3 437 aaKnown RBP28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Cd209bQ8CJ91 325 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Sgms1Q8VCQ6 419 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Lpin2Q99PI5 893 aa28.4■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Scgb2b19J3QM75 112 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Got1P05201 413 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 RaraP11416 462 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Cd68P31996 326 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Nr2f2P43135 414 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Ddx49Q4FZF3 480 aaKnown RBP28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Rhbdf1Q6PIX5 856 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Rps6ka5Q8C050 863 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Frat2Q8K025 231 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 FignQ9ERZ6 759 aa28.39■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Nmt1O70310 496 aaKnown RBP28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 NefhP19246 1090 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Psmc5P62196 406 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Mrps31Q61733 384 aaKnown RBP28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Phldb2Q8K1N2 1249 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Spata4Q8K3V1 295 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Usp33Q8R5K2 909 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Rrp9Q91WM3 475 aaKnown RBP28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Myh11O08638 1972 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Cnbd1B1AWM0 430 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Fgd3O88842 733 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Cyp11b2P15539 500 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 EmbP21995 330 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Sox10Q04888 466 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Gm5169Q5M8P2 212 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Adgre1Q61549 931 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Dhx37Q6NZL1 1150 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ddx10Q80Y44 875 aaKnown RBP28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 NkrfQ8BY02 690 aaKnown RBP28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Znf131Q8K3J5 619 aa28.38■■■□□ 2.13
Tpm1-216ENSMUST00000113707 PhipQ8VDD9 1821 aaKnown RBP28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Slc16a2O70324 545 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 SlmapQ3URD3 845 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Tgoln2Q62314 363 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ppp1r13bQ62415 1087 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Exoc3Q6KAR6 755 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Kcnk18Q6VV64 394 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Chtf18Q8BIW9 969 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Cog5Q8C0L8 829 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Stap2Q8R0L1 411 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Mov10l1Q99MV5 1187 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ccdc96Q9CR92 584 aa28.37■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Gm45194A0A140LJG2 572 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 UgcgO88693 394 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Rpl13P47963 211 aaKnown RBP28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Haus4Q8BFT2 363 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Ttc26Q8BS45 554 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Kiaa0391Q8JZY4 584 aaKnown RBP28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 YwhabQ9CQV8 246 aaKnown RBP28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Dnajc18Q9CZJ9 357 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Elf2Q9JHC9 593 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 AunipE9Q6Z5 340 aa28.36■■■□□ 2.13
Tpm1-216ENSMUST00000113707 Exoc4O35382 975 aa28.36■■■□□ 2.13
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms