RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Serpinb3dQ6UKZ0 387 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Ascc2Q91WR3 749 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Tgs1Q923W1 853 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Pdzd4Q9QY39 772 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Ifi202Q9R002 445 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Extl3Q9WVL6 918 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Gad1P48318 593 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Sox10Q04888 466 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Tsnaxip1Q99P25 704 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Tgm5Q9D7I9 724 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 GpiP06745 558 aaKnown RBP14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Brip1Q5SXJ3 1174 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Fez2Q6TYB5 348 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Cnksr2Q80YA9 1032 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Q8C5C9 218 aa14.59□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Plcg1Q62077 1302 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Gm45140A0A0N4SUM8 220 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Zfp984A2A7A2 547 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Nfx1B1AY10 1114 aaKnown RBP14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Krt31Q61765 416 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Hdac10Q6P3E7 666 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Fmnl3Q6ZPF4 1028 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Pnma1Q8C1C8 353 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 PccaQ91ZA3 724 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Mmtag2Q99LX5 260 aaKnown RBP14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 CalcbQ99MP3 130 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Tdrd1Q99MV1 1172 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Ddah1Q9CWS0 285 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Bbs5Q9CZQ9 341 aa14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Hyou1Q9JKR6 999 aaKnown RBP14.58□□□□□ -0.07
Clcn3-204ENSMUST00000110301 Gm44503E9PYU5 387 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Fermt1P59113 677 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Psmc5P62196 406 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Rasip1Q3U0S6 961 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Tm4sf1Q64302 202 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Ttc26Q8BS45 554 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Kiaa0391Q8JZY4 584 aaKnown RBP14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Lcmt1A0A0U1RNF2 332 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 SlmapQ3URD3 845 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Slc25a38Q91XD8 326 aa14.58□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Gm4307E9PZY4 289 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Gm4312K9J7E2 289 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Xrcc5P27641 732 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Psmc6P62334 389 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Olfr121Q5CZY0 321 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Supt20hQ7TT00 530 aaKnown RBP14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Olfr390Q8VEZ7 311 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 YwhabQ9CQV8 246 aaKnown RBP14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Snx10Q9CWT3 201 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Ribc1Q9D0B8 379 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Rsph3bQ9DA80 389 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Tpp1O89023 562 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Art2aP17981 287 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Map2k1P31938 393 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Nedd1P33215 660 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Tmod1P49813 359 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Rbm46P86049 533 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Fam49aQ8BHZ0 323 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Nemp2Q8CB65 421 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Ppil2Q9D787 521 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Zfyve19Q9DAZ9 389 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Rfpl4bJ3QPR6 266 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Zc3h18Q0P678 948 aaKnown RBP14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Ccdc85aQ5SP85 500 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Ppp2r5aQ6PD03 486 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Tbx22Q8K402 517 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Tpcn1Q9EQJ0 817 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Col4a1P02463 1669 aa14.57□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Kndc1Q0KK55 1742 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 DgkkE9Q7N4 1118 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Nhej1Q3KNJ2 295 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Asap3Q5U464 904 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Ces1eQ64176 562 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 E2f4Q8R0K9 410 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Tc2nQ91XT6 489 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Tlcd1Q99JT6 247 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Filip1Q9CS72 1211 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Itga2bQ9QUM0 1033 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Mmrn2A6H6E2 943 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Exoc4O35382 975 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Myo1fP70248 1099 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Ccdc84Q4VA36 332 aaKnown RBP14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Acad11Q80XL6 779 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Spata32Q8C5V0 334 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Cep19Q9CQA8 163 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 ChmQ9QXG2 665 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 YdjcQ14BV6 310 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Bbof1Q3V079 533 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Atp6v0d2Q80SY3 350 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 TbckQ8BM85 762 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Olfr397Q8VEZ6 315 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Mrps5Q99N87 432 aaKnown RBP14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Rhobtb3Q9CTN4 611 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Elp3Q9CZX0 547 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Mtmr9Q9Z2D0 545 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Pcdh11xF6ZNL5 1338 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 XdhQ00519 1335 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Gm45261A0A1B0GSP6 197 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Zfp174B9EJW5 407 aa14.56□□□□□ -0.08
Clcn3-204ENSMUST00000110301 Krt19P19001 403 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms