RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Kif22Q3V300 660 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 IgflQ6B9Z0 140 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 HhatQ8BMT9 499 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Josd2Q9CR30 188 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 3830403N18RikQ9D6C3 208 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 MefvQ9JJ26 767 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Usp14Q9JMA1 493 aaKnown RBP12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Pex11aQ9Z211 246 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ncf2O70145 525 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Xirp1O70373 1129 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Pstpip1P97814 415 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gdpd4Q3TT99 632 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Erich4Q3UNU4 136 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Slc30a9Q5IRJ6 567 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Hdac10Q6P3E7 666 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 FtoQ8BGW1 502 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Strip1Q8C079 837 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Mxra8Q9DBV4 442 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Hyou1Q9JKR6 999 aaKnown RBP12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Magea10A2AMW4 325 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ttc38A3KMP2 465 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Fam129cD3YZB0 591 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gcnt1Q09324 428 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 MlxipQ2VPU4 917 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Pnma5Q5DTT8 618 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 EsrrbQ61539 433 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Scyl2Q8CFE4 930 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 BlmhQ8R016 455 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Atp6v0a4Q920R6 833 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Aipl1Q924K1 328 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Acsl3Q9CZW4 720 aaKnown RBP12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 ArpinQ9D0A3 226 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Lrp2bpQ9D4C6 346 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Myh8P13542 1937 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Nova2D3YVV7 556 aaKnown RBP12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Pgrmc1O55022 195 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 D1Pas1P16381 660 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Tax1bp1Q3UKC1 814 aaKnown RBP12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 SlmapQ3URD3 845 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Fbxw10Q5SUS0 1030 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ccdc25Q78PG9 208 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gps2Q921N8 327 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Lpin2Q99PI5 893 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dph5Q9CWQ0 281 aa12.65□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Marf1Q8BJ34 1730 aaKnown RBP12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Duox1A2AQ92 1551 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 A0A286YCQ6 122 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ces1aE9PYP1 563 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Vmn2r79E9Q067 851 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Rfpl4bJ3QPR6 266 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ap1b1O35643 943 aaKnown RBP12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Cetn3O35648 167 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Msh3P13705 1091 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Art2aP17981 287 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Xrcc6P23475 608 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gja5Q01231 358 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gm5935Q497S0 212 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Stxbp3Q60770 592 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Krt9Q6RHW0 743 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Pip5kl1Q6U7H8 395 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gpr101Q80T62 511 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Slc35f6Q8VE96 372 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Xrcc4Q924T3 326 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Stat2Q9WVL2 923 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Mtmr2Q9Z2D1 643 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Kndc1Q0KK55 1742 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Dnaaf5B9EJR8 853 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Vmn2r68L7N2B3 851 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 RelaQ04207 549 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Sox13Q04891 613 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Muc3aQ3U5A2 218 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Clul1Q3ZRW6 464 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Krt35Q497I4 455 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Hoxa13Q62424 386 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 PigsQ6PD26 555 aaKnown RBP12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Lrrc4cQ8C031 640 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Afg3l2Q8JZQ2 802 aaKnown RBP12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Dusp19Q8K4T5 220 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Psmd2Q8VDM4 908 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Rabl3Q9D4V7 236 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 PigoQ9JJI6 1093 aa12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Prpf40aQ9R1C7 953 aaKnown RBP12.64□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Gm4985A2ALC6 410 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Kcnu1O54982 1121 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Psmc2P46471 433 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Psmc6P62334 389 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Nsun7Q14AW5 724 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Igf2bp2Q5SF07 592 aaKnown RBP12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 AsnsQ61024 561 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ccdc189Q6NZQ0 333 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Efcab14Q8BGQ6 484 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 PolrmtQ8BKF1 1207 aaKnown RBP12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Ccdc87Q8CDL9 855 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Mtmr4Q91XS1 1190 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Fam133bQ9CVI2 245 aaKnown RBP12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 BcamQ9R069 622 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Entpd5Q9WUZ9 427 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Sema4dO09126 861 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Orc4O88708 433 aa12.63□□□□□ -0.39
Col9a1-202ENSMUST00000088349 Lmnb2P21619 596 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms