RNA–Protein interactions for RNA: ENSMUST00000081170.8

Sgcb-201, Transcript of Beta-sarcoglycan, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sgcb, Length 3,786 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sgcb-201ENSMUST00000081170 Abcc12Q80WJ6 1366 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Iqca1lA6H690 825 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Zfp839E9PUU5 921 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Parp1P11103 1013 aaKnown RBP12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Cbx3P23198 183 aaKnown RBP12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Gja8P28236 440 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 ProcP33587 460 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Exosc10P56960 887 aaKnown RBP12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Dcaf17Q3TUL7 519 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ckap2Q3V1H1 664 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Klhdc10Q6PAR0 439 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Homer1Q9Z2Y3 366 aa12.56□□□□□ -0.4
Sgcb-201ENSMUST00000081170 R3hdm1E9Q9Q2 1135 aaKnown RBP12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Dnmt3aO88508 908 aaKnown RBP12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Card10P58660 1021 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 SpertQ32MG2 446 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Arhgap17Q3UIA2 846 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 WlsQ6DID7 541 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Snx30Q8CE50 437 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 SltmQ8CH25 1031 aaKnown RBP12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 HscbQ8K3A0 234 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Plcb4Q91UZ1 1175 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Abtb1Q99LJ2 478 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Fam227aQ9D3V8 625 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Hsf2bpQ9D4G2 338 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ndst4Q9EQW8 872 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Sash1P59808 1230 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Creb1Q01147 341 aaKnown RBP12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Prkab2Q6PAM0 271 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Nat14Q8BVG8 206 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 GckrQ91X44 587 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 LpxnQ99N69 386 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Syap1Q9D5V6 365 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Nop56Q9D6Z1 580 aaKnown RBP12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 SmapQ9R0P4 181 aaKnown RBP12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Rgsl1H3BL40 1073 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Pnma5Q5DTT8 618 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Chn2Q80XD1 332 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Cacnb1Q8R3Z5 597 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Tceal1Q921P9 165 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Prmt3Q922H1 532 aa12.55□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Foxm1O08696 760 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 CraddO88843 199 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Tmem120bQ3TA38 339 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Taok1Q5F2E8 1001 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 B3gnt3Q5JCS9 372 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Lrrn2Q6PHP6 730 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 PhkbQ7TSH2 1085 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Lyve1Q8BHC0 318 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 SnrkQ8VDU5 748 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Galnt15Q9D2N8 638 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ube4bQ9ES00 1173 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ccdc144bE9PVZ3 520 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Api5O35841 504 aaKnown RBP12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Grpel2O88396 224 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Rag1P15919 1040 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 CcnhQ61458 323 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ssx2ipQ8VC66 615 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Fkbp6Q91XW8 327 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Rasgrp2Q9QUG9 608 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Tmed2Q9R0Q3 201 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ubr1O70481 1757 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 PtproE9Q612 1226 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Map3k12Q60700 888 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Slc27a1Q60714 646 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Shc3Q61120 474 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 HnrnprQ8VHM5 632 aaKnown RBP12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Paip2bQ91W45 136 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Unc45aQ99KD5 944 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Slc13a1Q9JHI4 594 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Sgpp1Q9JI99 430 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Plagl1Q9JLQ4 704 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Pex3Q9QXY9 372 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Gfpt2Q9Z2Z9 682 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Speer3W4VSP1 261 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Usp31E9Q6Y8 1344 aa12.54□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Lonrf2B2RT44 518 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Gm44G3UW88 330 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 GpiP06745 558 aaKnown RBP12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ephb4P54761 987 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Nutm2Q3V0C3 733 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Snx25Q3ZT31 840 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Gpbp1Q6NXH3 473 aaKnown RBP12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Haus4Q8BFT2 363 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Rps6kc1Q8BLK9 1056 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Dclk3Q8BWQ5 790 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ttc39bQ8BYY4 617 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ccdc87Q8CDL9 855 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Haus8Q99L00 373 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Mms19Q9D071 1031 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Tomm20lQ9D4V6 152 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Galnt4O08832 578 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Wfs1P56695 890 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Arl1P61211 181 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Abi2P62484 446 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Ptprn2P80560 1001 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Gm5168Q4KL04 211 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Rnf168Q80XJ2 565 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Heatr3Q8BQM4 679 aa12.53□□□□□ -0.4
Sgcb-201ENSMUST00000081170 Atp2a1Q8R429 994 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms