RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ddx19aQ61655 478 aaKnown RBP13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Cypt4Q6P925 153 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Nsun6Q7TS68 476 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Samm50Q8BGH2 469 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ppp2r5dQ91V89 594 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Slc25a38Q91XD8 326 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Apobec3Q99J72 440 aaKnown RBP13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Mrpl44Q9CY73 333 aaKnown RBP13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Arpp21Q9DCB4 807 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ccnt1Q9QWV9 724 aaKnown RBP13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Kank3Q9Z1P7 791 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Nup210lQ9D2F7 1881 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gm11549A0A286YD83 63 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Arhgef10lA2AWP8 1280 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 SafbD3YXK2 937 aaKnown RBP13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gm3252E9PUT9 216 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gm38392E9Q2A2 434 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gm3468E9QAJ8 216 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Esr2O08537 530 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Clk2O35491 499 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Tap2P36371 702 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 CgnP59242 1191 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Lrrfip1Q3UZ39 729 aaKnown RBP13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Mief2Q5NCS9 454 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gas7Q60780 421 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gemin4Q6P6L6 1058 aaKnown RBP13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 VcpkmtQ8C436 228 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Rbm34Q8C5L7 375 aaKnown RBP13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Tspan8Q8R3G9 235 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Hs2st1Q8R3H7 356 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Kdm4cQ8VCD7 1054 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Rem2Q8VEL9 341 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 CutaQ9CQ89 177 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Q9CYI0 393 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Mkrn2Q9ERV1 416 aaKnown RBP13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Sertad1Q9JL10 236 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gm7173A0A0G2JEB6 3132 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Taf1Q80UV9 1891 aa13.7□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Per1O35973 1291 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gnrh1P13562 90 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Hps5P59438 1126 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 LyarQ08288 388 aaKnown RBP13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Spink5Q148R4 1017 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Slc9a2Q3ZAS0 814 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Acnat2Q8BGG9 420 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ppme1Q8BVQ5 386 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Fermt2Q8CIB5 680 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 GlyctkQ8QZY2 523 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ces4aQ8R0W5 563 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Clstn3Q99JH7 956 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ccdc96Q9CR92 584 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Saal1Q9D2C2 474 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Drc3Q9D5E4 523 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Nudt5Q9JKX6 218 aa13.69□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Rsbn1lD3Z0K6 821 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Mroh8E9PYI4 1049 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 TrdnE9Q9K5 693 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Rabep1O35551 862 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Pbx2O35984 430 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Cbfa2t2O70374 594 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 UgcgO88693 394 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 MarcksP26645 309 aaKnown RBP13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ccl5P30882 91 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Tulp2P46686 562 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 PklrP53657 574 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 RenbpP82343 430 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Tarbp2P97473 365 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Nfe2Q07279 373 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Bpifa6Q0VGU8 367 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Rufy4Q3TYX8 563 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 March9Q3TZ87 348 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Kcna4Q61423 654 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Madcam1Q61826 405 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Srd5a1Q68FF9 255 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 IqceQ6PCQ0 778 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Slc17a8Q8BFU8 601 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Prkag3Q8BGM7 489 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Usp38Q8BW70 1042 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Trim47Q8C0E3 641 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Dis3lQ8C0S1 1053 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Nemp2Q8CB65 421 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Evc2Q8K1G2 1220 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Nrbp2Q91V36 499 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Q922R1 422 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 NptxrQ99J85 493 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Tmem192Q9CXT7 266 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ttyh1Q9D3A9 450 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Acox2Q9QXD1 681 aa13.68□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Abcb11Q9QY30 1321 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gpr25P0C5I1 358 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ccr1P51675 355 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 SPINDOCQ05AH6 381 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Kcnma1Q08460 1209 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Lrrc36Q3V0M2 755 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Q5XFZ0 217 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Epha7Q61772 998 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ntan1Q64311 310 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Krt9Q6RHW0 743 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Serpinb3dQ6UKZ0 387 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 C6.1alQ7M757 291 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms