RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ppp1r11Q8K1L5 131 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 AagabQ8R2R3 316 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ebag9Q9D0V7 213 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Klc4Q9DBS5 619 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Zfp984A2A7A2 547 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Fam129cD3YZB0 591 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Aknad1E9Q8N6 675 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Zfp213E9QAW0 468 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ctnna1P26231 906 aaKnown RBP10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 MlxipQ2VPU4 917 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tbc1d9bQ5SVR0 1263 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Chtf18Q8BIW9 969 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Kiaa0319lQ8K135 1048 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Acsl3Q9CZW4 720 aaKnown RBP10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Znf287Q9EQB9 759 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 MycbpQ9EQS3 103 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gkap1Q9JMB0 366 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Myh10Q61879 1976 aaKnown RBP10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Fer1l6E0CZ42 1862 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Cyp2e1Q05421 493 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Zc3h18Q0P678 948 aaKnown RBP10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rasip1Q3U0S6 961 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gm5935Q497S0 212 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 R3hdm2Q80TM6 1044 aaKnown RBP10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 FtoQ8BGW1 502 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Amhr2Q8K592 568 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Enox2Q8R0Z2 598 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 CbsQ91WT9 561 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Pcdhb5Q91XZ5 792 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 ArpinQ9D0A3 226 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 3830403N18RikQ9D6C3 208 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Irx5Q9JKQ4 484 aa10.71□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lamb1P02469 1786 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Chd5A2A8L1 1946 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Qrich1Q3UA37 777 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 BC051142Q3V0M8 400 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Igf2bp2Q5SF07 592 aaKnown RBP10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Wdr44Q6NVE8 915 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Trmt2aQ8BNV1 574 aaKnown RBP10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Als2cr12Q8BVM7 383 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ccdc87Q8CDL9 855 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Il17cQ8K4C5 194 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Chn1Q91V57 459 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Xrcc4Q924T3 326 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 IkQ9Z1M8 557 aaKnown RBP10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Gfpt2Q9Z2Z9 682 aa10.71□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Cacna1sQ02789 1880 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 1700017N19RikA0A087WPJ1 469 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Nr1i3O35627 358 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ppfibp2O35711 882 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Atp6v0a2P15920 856 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Lmnb2P21619 596 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Vps33bP59016 617 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Klra9Q2TJJ8 266 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Mettl14Q3UIK4 456 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Map3k12Q60700 888 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 PodnQ7TQ62 611 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Drd5Q8BLD9 478 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 RalylQ8BTF8 293 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Cgref1Q8R1U2 281 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Aipl1Q924K1 328 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Dph5Q9CWQ0 281 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 4931423N10RikQ9D4J9 382 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Rabl3Q9D4V7 236 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 MefvQ9JJ26 767 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 BcamQ9R069 622 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Hnrnph2P70333 449 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tax1bp1Q3UKC1 814 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ddx49Q4FZF3 480 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Kiaa1211Q5PR69 1207 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tsc2Q61037 1814 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Pank4Q80YV4 820 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ift74Q8BKE9 600 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Lrrc4cQ8C031 640 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Senp2Q91ZX6 588 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Akt1s1Q9D1F4 257 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Nap1l5Q9JJF0 156 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 MtrA6H5Y3 1253 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Hnrnph1O35737 449 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 CraddO88843 199 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Mucl2P02815 138 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 RelaQ04207 549 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Klhdc9Q3USL1 350 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Akap4Q60662 849 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Cplx4Q80WM3 160 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Rbm41Q8JZV4 413 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Actn2Q9JI91 894 aa10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Cdc42ep4Q9JM96 349 aaKnown RBP10.7□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Ncf2O70145 525 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Tspyl5Q69ZB3 406 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 PolrmtQ8BKF1 1207 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 HhatQ8BMT9 499 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Slc4a8Q8JZR6 1089 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Dnajc28Q8VCE1 385 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Dr1Q91WV0 176 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Q91Z58 1206 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Sh2b2Q9JID9 621 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Rbm6S4R1W5 1118 aaKnown RBP10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Kif13bA0A286YCV9 1847 aa10.69□□□□□ -0.7
Ccdc40-202ENSMUST00000053440 Usp4P35123 962 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms