RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Ankrd63A2ARS0 390 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 VdrP48281 422 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Slc8a1P70414 970 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Olfr121Q5CZY0 321 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Rsad1Q5SUV1 442 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Slfnl1Q8BHW9 410 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Clasp2Q8BRT1 1286 aaKnown RBP13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Zfyve16Q80U44 1528 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Fam81aQ3UXZ6 364 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Zfp449Q8CB76 518 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ndufv1Q91YT0 464 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 CalcbQ99MP3 130 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Cd2apQ9JLQ0 637 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Prkab1Q9R078 270 aa13.48□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gap43P06837 227 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Znf652Q5DU09 608 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Proser2Q8C5R2 471 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Thoc1Q8R3N6 657 aaKnown RBP13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Wbp11Q923D5 641 aaKnown RBP13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ttc13A0A1L1SSC7 844 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Lrriq4A6H6A4 596 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 LtbrP50284 415 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 NxnP97346 435 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Krt31Q61765 416 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Pja2Q80U04 707 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Atp5c1Q91VR2 298 aaKnown RBP13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ecel1Q9JMI0 775 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Dach1Q9QYB2 751 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 GpiP06745 558 aaKnown RBP13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Cyp2d10P24456 504 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Palb2Q3U0P1 1104 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Iqcb1Q8BP00 598 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ppm1kQ8BXN7 372 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Rsph3bQ9DA80 389 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gm28043E0CXC2 719 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Casp2P29594 452 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Epha2Q03145 977 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ckap2Q3V1H1 664 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Bpifb6Q8BU51 449 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Pomgnt1Q91X88 660 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Eif2ak1Q9Z2R9 619 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Frmpd4A2AFR3 1320 aa13.47□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Taf4bG5E8Z2 855 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gm21962L7N280 338 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 RpsaP14206 295 aaKnown RBP13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Igfbp6P47880 238 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 RubcnlQ3TD16 648 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Acbd5Q5XG73 508 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Senp6Q6P7W0 1132 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Abhd8Q8R0P8 439 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 SnrkQ8VDU5 748 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 PtprmP28828 1452 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Pde6bP23440 856 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Irx1P81068 480 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Zc3h18Q0P678 948 aaKnown RBP13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ccdc84Q4VA36 332 aaKnown RBP13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Vmn1r209Q5NC97 312 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Krt5Q922U2 580 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Calr3Q9D9Q6 380 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Diaph3Q9Z207 1171 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Serpina3iD3Z450 408 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ttf2Q5NC05 1138 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Churc1Q6DG52 112 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Actr5Q80US4 605 aaKnown RBP13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Fam102bQ8BQS4 339 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Abcf2Q99LE6 628 aaKnown RBP13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Sytl1Q99N80 567 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Pramef12Q9D2F1 463 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Rbm31yQ9D3U4 565 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Drap1Q9D6N5 205 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Fthl17aQ9DAX0 182 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gipc1Q9Z0G0 333 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Neurl4Q5NCX5 1563 aa13.46□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Vmn2r71L7N2D8 855 aa13.46□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Morc2bQ8C5W4 1022 aa13.46□□□□□ -0.26
Sdf4-201ENSMUST00000050078 CgasQ8C6L5 507 aa13.46□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Rpap2Q8VC34 614 aa13.46□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Cnot8Q9D8X5 292 aa13.46□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Itga2bQ9QUM0 1033 aa13.46□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Ccdc175E9PVB3 822 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Mgat1P27808 447 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Kcnb1Q03717 857 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Llgl2Q3TJ91 1027 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Ttbk2Q3UVR3 1243 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Cnga4Q3UW12 575 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 ItgaeQ60677 1167 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Rasa3Q60790 834 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Mrps31Q61733 384 aaKnown RBP13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Q80ZQ3 298 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Ankrd45Q810N6 248 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Ms4a5Q810P8 197 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 H6pdQ8CFX1 789 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Drc3Q9D5E4 523 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Syap1Q9D5V6 365 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Wdr19Q3UGF1 1341 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Nuak1Q641K5 658 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Mxd3Q80US8 206 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Wdr27Q8C5V5 780 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Cox16Q9CR63 106 aa13.45□□□□□ -0.26
Sdf4-201ENSMUST00000050078 Cdc42bpgQ80UW5 1551 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms