RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Clk1P22518 483 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Usp4P35123 962 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Orc2Q60862 576 aaKnown RBP9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Aldh5a1Q8BWF0 523 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tmem62Q8BXJ9 643 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cfap53Q9D439 514 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tjp2Q9Z0U1 1167 aaKnown RBP9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Sel1lQ9Z2G6 790 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Nfil3O08750 462 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Dctn1O08788 1281 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ppef2O35385 757 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Man1a2P39098 641 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Actn4P57780 912 aaKnown RBP9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Senp1P59110 640 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Nhej1Q3KNJ2 295 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Rnf207Q3V3A7 635 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ksr1Q61097 873 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Kctd3Q8BFX3 815 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Drd5Q8BLD9 478 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 E330017A01RikQ8BU47 192 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Usp38Q8BW70 1042 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lsm14bQ8CGC4 385 aaKnown RBP9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Slf1Q8R3P9 1054 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 1700020D05RikQ99PB1 294 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Bzw1Q9CQC6 419 aaKnown RBP9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Psma8Q9CWH6 250 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cul3Q9JLV5 768 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cul1Q9WTX6 776 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Gm45208A0A140LJ36 292 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tcp10bE9PYJ0 438 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ube4aE9Q735 1028 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Nr1i3O35627 358 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ctnna1P26231 906 aaKnown RBP9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ftl1P29391 183 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Rgs9bpQ148R9 237 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Mdh1bQ5F204 500 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Asap3Q5U464 904 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Esco1Q69Z69 843 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cspg5Q71M36 566 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Zic5Q7TQ40 622 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cep104Q80V31 926 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Slx1bQ8BX32 270 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Krt79Q8VED5 531 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Mettl13Q91YR5 698 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Krtap5-3Q9D226 196 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Mrps9Q9D7N3 390 aaKnown RBP9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 1700109H08RikQ9D9C0 210 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Mtmr9Q9Z2D0 545 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Nrxn3Q6P9K9 1571 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Btbd18A0A0A6YY25 723 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Mapkapk5O54992 473 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Men1O88559 611 aaKnown RBP8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Becn2P0DM65 447 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Msh3P13705 1091 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Rps6ka1P18653 724 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 VimP20152 466 aaKnown RBP8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Epb41l4aP52963 686 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Nlrx1Q3TL44 975 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Armc2Q3URY6 854 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Drc1Q3USS3 753 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Gm5169Q5M8P2 212 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cacna2d4Q5RJF7 1116 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tlr11Q6R5P0 926 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Slc39a11Q8BWY7 342 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ccdc159Q8C963 411 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ccdc105Q9D4K7 499 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Acot3Q9QYR7 432 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lgr5Q9Z1P4 907 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Mtmr7Q9Z2C9 660 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ankrd31A0A140LI88 1765 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Eftud2O08810 971 aaKnown RBP8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Usp53P15975 1069 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Btg3P50615 252 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Dab2P98078 766 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 RelaQ04207 549 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Trpc6Q61143 930 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 EregQ61521 162 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ppp1r14bQ62084 147 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lrrc15Q80X72 579 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ccdc50Q810U5 305 aaKnown RBP8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Haus1Q8BHX1 278 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 RalylQ8BTF8 293 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 ClasrpQ8CFC7 668 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Stx17Q9D0I4 301 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Mrpl12Q9DB15 201 aaKnown RBP8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cacna2d3Q9Z1L5 1091 aa8.99□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ankrd63A2ARS0 390 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lrriq4A6H6A4 596 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Trappc3O55013 180 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cd44P15379 778 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 ProcP33587 460 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Sema3eP70275 775 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Slc8a1P70414 970 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Kcnma1Q08460 1209 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Znf827Q505G8 1078 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Kctd16Q5DTY9 427 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Madcam1Q61826 405 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Scfd2Q8BTY8 684 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cadps2Q8BYR5 1297 aa8.98□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cog5Q8C0L8 829 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms