RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cul4bA2A432 970 aaKnown RBP12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 TchpQ3TVW5 497 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Q80ZQ3 298 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 N4bp3Q8C7U1 537 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Rab3il1Q8VDV3 383 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Elp3Q9CZX0 547 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 En2P09066 324 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gdf10P97737 476 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 YwhabQ9CQV8 246 aaKnown RBP12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Bub1bQ9Z1S0 1052 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Lmnb2P21619 596 aaKnown RBP12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Cracr2aQ3UP38 310 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Dpf1Q9QX66 387 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Eya4Q9Z191 616 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Mroh7A2AVR2 1279 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tmem132bF7BAB2 1078 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 P01734 135 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 LeprP48356 1162 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ccdc57Q6PHN1 1016 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Pnma1Q8C1C8 353 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tmem60Q8K174 133 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Vstm4T1NXB5 319 aa12.87□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Actn3O88990 900 aaKnown RBP12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ssx2ipQ8VC66 615 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Rnf6Q9DBU5 667 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Igsf9bE9PZ19 1328 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Kcnk18Q6VV64 394 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 D130040H23RikQ8BII3 405 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tcp11l2Q8K1H7 517 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Alg3Q8K2A8 438 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gga1Q8R0H9 635 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 BbxQ8VBW5 907 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Castor1Q9CWQ8 331 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tob2Q9JM55 345 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Trappc11B2RXC1 1133 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 DgkkE9Q7N4 1118 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Rasgrf1P27671 1262 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ddit3P35639 168 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ppp1r1bQ60829 194 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Oxsr1Q6P9R2 527 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Acot5Q6Q2Z6 421 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 SpidrQ8BGX7 933 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Atp6v0a4Q920R6 833 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Med7Q9CZB6 233 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Nav1Q8CH77 1875 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Bace1P56818 501 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Sesn2P58043 480 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Znf827Q505G8 1078 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Krt77Q6IFZ6 572 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Cyfip1Q7TMB8 1253 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Wdr3Q8BHB4 942 aaKnown RBP12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Klhl11Q8CE33 709 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Fam20aQ8CID3 541 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ddx41Q91VN6 622 aaKnown RBP12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gm10436L7N1Y3 520 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gad1P48318 593 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Adcy8P97490 1249 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Edem3Q2HXL6 931 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ddah1Q9CWS0 285 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Psmg1Q9JK23 289 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 ChmQ9QXG2 665 aa12.86□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Mark2Q05512 776 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Kcnma1Q08460 1209 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tshz1Q5DTH5 1084 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Veph1A1A535 833 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Abcb5B5X0E4 1255 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 IvlP48997 467 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Rbp3P49194 1234 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ccdc38Q8CDN8 563 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tmem134Q8R0J4 195 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 IrgqQ8VIM9 583 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Unc13bQ9Z1N9 1602 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Bfsp1A2AMT1 669 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Kcnh2O35219 1162 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Olfr119Q7TRJ5 321 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Mrgprx1Q8CIP3 322 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Slc26a6Q8CIW6 758 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Olfr1494Q8VGP8 315 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Pla2g12bQ99P27 195 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Wdr64Q9D565 1086 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 1700016G14RikA0A286YCZ6 238 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Exoc3l2D3YUP5 789 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Arl1P61211 181 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Arhgef16Q3U5C8 713 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Foxn3Q499D0 457 aa12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Vwa5aQ99KC8 793 aaKnown RBP12.85□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Timm44O35857 452 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Epha2Q03145 977 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Krt12Q64291 487 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Q6PD19 689 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gigyf2Q6Y7W8 1291 aaKnown RBP12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Fam160b1Q8CDM8 764 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Trim60Q8VI40 466 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 XlrP05531 208 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 CebpaP53566 359 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Kcnb1Q03717 857 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Sox13Q04891 613 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Armcx2Q6A058 784 aaKnown RBP12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 RbsnQ80Y56 783 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Slc26a7Q8R2Z3 656 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms