RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Nlrp4eQ66X19 978 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ece2Q80Z60 881 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gpr150Q8BL07 427 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Slc39a11Q8BWY7 342 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ppp4r1Q8K2V1 951 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 IrgqQ8VIM9 583 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Fam84aQ9D650 292 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Klc4Q9DBS5 619 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Hic2Q9JLZ6 619 aaKnown RBP8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Abt1Q9QYL7 269 aaKnown RBP8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Timm44O35857 452 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Sesn2P58043 480 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Evi5P97366 809 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Fbxw10Q5SUS0 1030 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Wdr3Q8BHB4 942 aaKnown RBP8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Trim68Q8K243 485 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Acat1Q8QZT1 424 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Vwa5aQ99KC8 793 aaKnown RBP8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Rpa3Q9CQ71 121 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Elp3Q9CZX0 547 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Cbx6Q9DBY5 414 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Abca9Q8K449 1623 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gm14525B1AZA0 212 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gm2012B1B0R1 212 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Elmsan1E9Q2I4 1089 aaKnown RBP8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Myo1eE9Q634 1107 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Rad51ap2G3UW63 976 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 HunkO88866 714 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 HalP35492 657 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Lmntd2Q0VET5 664 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Lrch2Q3UMG5 773 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Krt32Q62168 407 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gm14819Q62478 212 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Acad11Q80XL6 779 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Map10Q8BJS7 891 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 EmsyQ8BMB0 1264 aaKnown RBP8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Daam1Q8BPM0 1077 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ankk1Q8BZ25 745 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Cog5Q8C0L8 829 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Upb1Q8VC97 393 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Golga1Q9CW79 758 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Ifi35Q9D8C4 286 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Rmdn1Q9DCV4 305 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Mtmr1Q9Z2C4 669 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Topbp1Q6ZQF0 1515 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Psmc5P62196 406 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Gbp10Q000W5 611 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Trip13Q3UA06 432 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 1810065E05RikQ5NC41 235 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Zc4h2Q68FG0 224 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Atp1a2Q6PIE5 1020 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Atxn2lQ7TQH0 1049 aaKnown RBP8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Kiaa0391Q8JZY4 584 aaKnown RBP8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Kcnk13Q8R1P5 405 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Rnf6Q9DBU5 667 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Dctpp1Q9QY93 170 aa8.09□□□□□ -1.11
Usp40-201ENSMUST00000040783 Nlrp1bA1Z198 1177 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Gm3893E9Q1I1 302 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Zc3h7bF8VPP8 982 aaKnown RBP8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Aoc3O70423 765 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Mmp14P53690 582 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Cct5P80316 541 aaKnown RBP8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Agbl1Q09M05 972 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Naif1Q6PFD7 327 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Acot5Q6Q2Z6 421 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Spata32Q8C5V0 334 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Il31raQ8K5B1 716 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Prpf6Q91YR7 941 aaKnown RBP8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Ska2Q9CR46 120 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Pold3Q9EQ28 462 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Cib2Q9Z309 187 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Cul4bA2A432 970 aaKnown RBP8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Abcb5B5X0E4 1255 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Nkx1-1G3UXB3 402 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Fam167bP17257 162 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Lig1P37913 916 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Ap5z1Q3U829 807 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Fam198bQ3UPI1 517 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Mum1l1Q4VA55 681 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 SkiQ60698 725 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Atp2a3Q64518 1038 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Krt39Q6IFX4 482 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Rab11fip4Q8BQP8 635 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Spata2Q8K004 515 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Taf1dQ9D4V4 322 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Elf2Q9JHC9 593 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Atp11cQ9QZW0 1129 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Kansl3A2RSY1 903 aaKnown RBP8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Exoc3l2D3YUP5 789 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 A430078G23RikE9Q7Y4 484 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Tcp1P11983 556 aaKnown RBP8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 EmbP21995 330 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Rtkn2Q14B46 604 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Il17raQ60943 864 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Ncoa7Q6DFV7 943 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Usp8Q80U87 1080 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Usp6nlQ80XC3 819 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Enox1Q8BHR2 643 aaKnown RBP8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 NcaphQ8C156 731 aa8.08□□□□□ -1.12
Usp40-201ENSMUST00000040783 Nrbp1Q99J45 535 aa8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms