RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Add1Q9QYC0 735 aaKnown RBP16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ttc13A0A1L1SSC7 844 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Zfp408H7BX78 710 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gucy1b3O54865 620 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ap1m1P35585 423 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Psmc2P46471 433 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Sap30bpQ02614 308 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Tex11Q14AT2 947 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Krt35Q497I4 455 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 KhnynQ80U38 671 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Chtf18Q8BIW9 969 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 3830403N18RikQ9D6C3 208 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 DgkiD3YWQ0 1071 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 Fam129cD3YZB0 591 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 Nfxl1E9Q8I7 918 aaKnown RBP16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 Kcnu1O54982 1121 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 Fbxw10Q5SUS0 1030 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 E2f5Q61502 335 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 Zdhhc24Q6IR37 284 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 AarsQ8BGQ7 968 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ythdf3Q8BYK6 585 aaKnown RBP16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ccdc134Q8C7V8 229 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 ParnQ8VDG3 624 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 NapaQ9DB05 295 aa16.39■□□□□ 0.21
Nup54-201ENSMUST00000038514 Atp6v0a2P15920 856 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Serpina1bP22599 413 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Fdx1P46656 188 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pkn1P70268 946 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Klra9Q2TJJ8 266 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Skap1Q3UUV5 355 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Six2Q62232 296 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Wdr44Q6NVE8 915 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Hdac10Q6P3E7 666 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 R3hdm2Q80TM6 1044 aaKnown RBP16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ttll1Q91V51 423 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 CbsQ91WT9 561 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 2310002L09RikQ9D7L5 217 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Nap1l5Q9JJF0 156 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Gjc1P28229 396 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 AdkP55264 361 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Eef2P58252 858 aaKnown RBP16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rasip1Q3U0S6 961 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Epha7Q61772 998 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Bud13Q8R149 637 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Nup58Q8R332 587 aa16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Bzw2Q91VK1 419 aaKnown RBP16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 RtcbQ99LF4 505 aaKnown RBP16.38■□□□□ 0.21
Nup54-201ENSMUST00000038514 Clcn6O35454 870 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 AurkbO70126 345 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Wdhd1P59328 1117 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Sox13Q04891 613 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Nlrp4cQ3TKR3 982 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Nlrp2Q4PLS0 1046 aaKnown RBP16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rbm26Q6NZN0 1012 aaKnown RBP16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 PigsQ6PD26 555 aaKnown RBP16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Nap1l4Q78ZA7 375 aaKnown RBP16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Vps37cQ8R105 352 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Slc12a6Q924N4 1150 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rfc4Q99J62 364 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Josd2Q9CR30 188 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Rasgef1cQ9D300 466 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Cog1Q9Z160 980 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Slurp2P0DP59 97 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pcif1P59114 706 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Zc3h18Q0P678 948 aaKnown RBP16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ccdc33Q3ULW6 985 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Kctd1Q5M956 257 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Trmt2aQ8BNV1 574 aaKnown RBP16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Scfd2Q8BTY8 684 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ccdc186Q8C9S4 917 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Calml4Q91WQ9 153 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Txnrd3Q99MD6 652 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 ArpinQ9D0A3 226 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Arhgap33Q80YF9 1305 aa16.37■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ttll10A4Q9F3 704 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Dnaaf5B9EJR8 853 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Wdr72D3YYM4 1114 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Mroh8E9PYI4 1049 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Psmc6P62334 389 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Cyp2e1Q05421 493 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Cul4aQ3TCH7 759 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Wdr70Q3TWF6 657 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Mettl14Q3UIK4 456 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Klrg2Q3UM83 387 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ddx49Q4FZF3 480 aaKnown RBP16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 FtoQ8BGW1 502 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ergic2Q9CR89 377 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Gm28036V9GXJ1 658 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ap1b1O35643 943 aaKnown RBP16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Mpp3O88910 568 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ctnna1P26231 906 aaKnown RBP16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Znf367Q0VDT2 340 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Cyfip2Q5SQX6 1253 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Pick1Q62083 416 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Acad11Q80XL6 779 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 E330017A01RikQ8BU47 192 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Tsnaxip1Q99P25 704 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 Zbed3Q9D0L1 228 aa16.36■□□□□ 0.21
Nup54-201ENSMUST00000038514 1700016G14RikA0A286YCZ6 238 aa16.35■□□□□ 0.21
Nup54-201ENSMUST00000038514 Ncf2O70145 525 aa16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms