RNA–Protein interactions for RNA: ENSMUST00000031894.12

Clcn1-201, Transcript of Chloride channel protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn1, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1-201ENSMUST00000031894 PicalmQ7M6Y3 660 aaKnown RBP11.14□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Pgrmc2Q80UU9 217 aaKnown RBP11.14□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Ccdc122Q8BVN0 290 aa11.14□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Epha10Q8BYG9 1007 aa11.14□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Zkscan3Q91VW9 553 aa11.14□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Dph6Q9CQ28 267 aa11.14□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Cul5Q9D5V5 780 aa11.14□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Apol7aB2RT54 418 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Celf5D3Z4T1 395 aaKnown RBP11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Foxn2E9Q7L6 429 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Parp1P11103 1013 aaKnown RBP11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Nkx2-5P42582 318 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Zfp90Q61967 636 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Fbxo10Q7TQF2 950 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Supt20hQ7TT00 530 aaKnown RBP11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 HhatQ8BMT9 499 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Abcf2Q99LE6 628 aaKnown RBP11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Syf2Q9D198 242 aaKnown RBP11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Atrnl1Q6A051 1378 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Cul4bA2A432 970 aaKnown RBP11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Ppp1r9aH3BJD6 1292 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Cdh15P33146 784 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Rnf216P58283 853 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Fam83hQ148V8 1209 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Hoxa13Q62424 386 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 NkapQ9D0F4 415 aaKnown RBP11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Fam173bQ9D1Z3 247 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Fut8Q9WTS2 575 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Peg10Q7TN75 958 aaKnown RBP11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Tcp10aQ80W76 438 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Nim1kQ8BHI9 436 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Rab11fip4Q8BQP8 635 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Asic2Q925H0 512 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Spc24Q9D083 201 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Gm11983V9GXS8 105 aa11.13□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Usp34Q6ZQ93 3582 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Gm10378F6XQQ1 160 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Pou3f3P31361 497 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Tdo2P48776 406 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 HrQ61645 1182 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Fam161bQ8CB59 589 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Slc12a8Q8VI23 705 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Txndc5Q91W90 417 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 HgsQ99LI8 775 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Myo1hQ9D6A1 958 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Eif4enif1Q9EST3 983 aaKnown RBP11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Tmem191cQ9JJB1 302 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 PigoQ9JJI6 1093 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Itga2bQ9QUM0 1033 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Tjp3Q9QXY1 905 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Tubb5P99024 444 aaKnown RBP11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Nsrp1Q5NCR9 542 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Hdac4Q6NZM9 1076 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Sap130Q8BIH0 1057 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Dpp9Q8BVG4 862 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Spata16Q8C636 571 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Spice1Q8C804 860 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Fermt2Q8CIB5 680 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Prkag2Q91WG5 566 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Lamp1P11438 406 aaKnown RBP11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Tmod1P49813 359 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Islr2Q5RKR3 745 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Gpbp1Q6NXH3 473 aaKnown RBP11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Zfp446Q8C9M8 523 aa11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Fam133bQ9CVI2 245 aaKnown RBP11.12□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Lama2Q60675 3118 aaKnown RBP11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Trpm7Q923J1 1863 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Zfp853A0A1D5RM95 733 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Zfand4D3Z3C6 739 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 IkbkbO88351 757 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 GclcP97494 637 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Slc16a10Q3U9N9 512 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Yipf3Q3UDR8 347 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Olfr121Q5CZY0 321 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Mcm7Q61881 719 aaKnown RBP11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Clca4aQ6Q473 924 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Phf8Q80TJ7 1023 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Smco2Q9DA21 347 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Arpp21Q9DCB4 807 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Scgb2b18A0A087WPA9 112 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Skint3A7TZF0 458 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Tmigd3G3X8R9 209 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Lrrc4bP0C192 709 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Nr5a1P33242 462 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Fndc3bQ6NWW9 1207 aaKnown RBP11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Ccdc25Q78PG9 208 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Efcab14Q8BGQ6 484 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Dlk2Q8K1E3 382 aa11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Nxf1Q99JX7 618 aaKnown RBP11.11□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Cst8P32766 142 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Hmgcs2P54869 508 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Wdr70Q3TWF6 657 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Sco1Q5SUC9 284 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Asic1Q6NXK8 526 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Lca5lQ8C0X0 741 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Oxnad1Q8VE38 311 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Gmcl1Q920G9 524 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 SrcapA0A087WQ44 3271 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Rexo5D3YW29 759 aa11.1□□□□□ -0.63
Clcn1-201ENSMUST00000031894 Gm5934D3Z4U6 212 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms