RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Ppm1eQ80TL0 749 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 PaoxQ8C0L6 504 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 TxlnbQ8VBT1 685 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Golph3Q9CRA5 298 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Dock2Q8C3J5 1828 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gm3095E9Q058 166 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Zc3h7bF8VPP8 982 aaKnown RBP16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Guca2bO09051 106 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Zfpm1O35615 995 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Vars2Q3U2A8 1060 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Recql4Q75NR7 1216 aaKnown RBP16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Coa7Q921H9 231 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ube2sQ921J4 223 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Arfgap2Q99K28 520 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Nxnl2Q9D531 156 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Usp14Q9JMA1 493 aaKnown RBP16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ccdc88cQ6VGS5 2009 aa16.49■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 FosP01101 380 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Epb41l4aP52963 686 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 PltpP55065 493 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gngt1Q61012 74 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Krt74Q6IFZ9 495 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Bcas3Q8CCN5 928 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Apbb1ipQ8R5A3 670 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gmcl1Q920G9 524 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Myh14Q6URW6 2000 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Nrxn2E9Q7X7 1710 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Akap2O54931 893 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Rbm46P86049 533 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Rapgef1Q3UHC1 1224 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 PnocQ64387 187 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Prdm4Q80V63 803 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 CnstQ8CBC4 711 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Scyl2Q8CFE4 930 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Tjp2Q9Z0U1 1167 aaKnown RBP16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Trim30cD3YVI9 513 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ddx3xQ62167 662 aaKnown RBP16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Adgrg6Q6F3F9 1165 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Tmc3Q7TQ69 1130 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Trim6Q8BGE7 488 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Enox2Q8R0Z2 598 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 PpanQ91YU8 470 aaKnown RBP16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Pstpip2Q99M15 334 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Stx17Q9D0I4 301 aa16.48■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Usp17ldG5E8G2 545 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Usp17lcG5E8I7 545 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gm42641I6L9G2 585 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Slc27a3O88561 667 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Wee1P47810 646 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Siah1bQ06985 282 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Bbof1Q3V079 533 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 AtripQ8BMG1 785 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Slc4a8Q8JZR6 1089 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Anapc4Q91W96 807 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Sh2b2Q9JID9 621 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ifi202Q9R002 445 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Usp31E9Q6Y8 1344 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 GabreA2AMW3 916 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Il27raO70394 623 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Hsd17b1P51656 344 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Muc3aQ3U5A2 218 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ppp1r7Q3UM45 361 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Krt31Q61765 416 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Krt42Q6IFX2 452 aa16.47■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Akr1b10G5E895 316 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Rad51bO35719 350 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Kcnu1O54982 1121 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Klra9Q2TJJ8 266 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Tigd5Q499M4 642 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ift20Q61025 132 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Epha7Q61772 998 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 SugctQ7TNE1 436 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Plekhg6Q8R0J1 787 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Q91Z58 1206 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ccdc83Q9D4V3 305 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Arhgef7Q9ES28 862 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Phtf1Q9QZ09 761 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Mrvi1Q9WUX5 899 aaKnown RBP16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Scgb2b12S4R2L0 112 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Sco1Q5SUC9 284 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Sycp1Q62209 993 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Zrsr2Q62377 462 aaKnown RBP16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Swap70Q6A028 585 aaKnown RBP16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Acad11Q80XL6 779 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Il17cQ8K4C5 194 aa16.46■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ranbp1P34022 203 aaKnown RBP16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Mmp14P53690 582 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Surf6P70279 355 aaKnown RBP16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Tcp10aQ80W76 438 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 P2ry10Q8BFU7 328 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Rufy1Q8BIJ7 712 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 IarsQ8BU30 1262 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ccdc113Q8C5T8 377 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Calhm4Q8CE93 315 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ago4Q8CJF8 861 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Spats2Q8K1N4 545 aaKnown RBP16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Pabpc6Q9D4E6 643 aaKnown RBP16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Eya4Q9Z191 616 aa16.46■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Mmp15O54732 657 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 ChkbO55229 394 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms