RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C YCK1P23291 538 aa4.32□□□□□ -1.72
GDE1YPL110C PEX4P29340 183 aa4.32□□□□□ -1.72
GDE1YPL110C DEG1P31115 442 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C ECM25P32525 599 aa4.32□□□□□ -1.72
GDE1YPL110C PTM1P32857 523 aa4.32□□□□□ -1.72
GDE1YPL110C PRE3P38624 215 aa4.32□□□□□ -1.72
GDE1YPL110C VRG4P40107 337 aa4.32□□□□□ -1.72
GDE1YPL110C HXT9P40885 567 aa4.32□□□□□ -1.72
GDE1YPL110C SOL1P50278 321 aa4.32□□□□□ -1.72
GDE1YPL110C SOK2P53438 785 aaPredicted RBP4.32□□□□□ -1.72
GDE1YPL110C SAE3P89114 91 aa4.32□□□□□ -1.72
GDE1YPL110C YLR456WQ06199 204 aa4.32□□□□□ -1.72
GDE1YPL110C SNX3Q08826 162 aaKnown RBP4.32□□□□□ -1.72
GDE1YPL110C ATX2Q12067 313 aa4.32□□□□□ -1.72
GDE1YPL110C GRX6Q12438 231 aa4.32□□□□□ -1.72
GDE1YPL110C ECM3Q99252 613 aa4.32□□□□□ -1.72
GDE1YPL110C RFA1P22336 621 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C KIN82P25341 720 aa4.31□□□□□ -1.72
GDE1YPL110C ILV6P25605 309 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C SER1P33330 395 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C SNU114P36048 1008 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C YBR032WP38223 100 aa4.31□□□□□ -1.72
GDE1YPL110C ECM2P38241 364 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C AME1P38313 324 aa4.31□□□□□ -1.72
GDE1YPL110C CCT2P39076 527 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C THI6P41835 540 aa4.31□□□□□ -1.72
GDE1YPL110C EMC2P47133 292 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C DIE2P50076 525 aa4.31□□□□□ -1.72
GDE1YPL110C PUS6P53294 404 aa4.31□□□□□ -1.72
GDE1YPL110C TIM44Q01852 431 aa4.31□□□□□ -1.72
GDE1YPL110C MSC1Q03104 513 aa4.31□□□□□ -1.72
GDE1YPL110C FMN1Q03778 218 aa4.31□□□□□ -1.72
GDE1YPL110C ATC1Q04005 294 aa4.31□□□□□ -1.72
GDE1YPL110C YDR109CQ04585 715 aa4.31□□□□□ -1.72
GDE1YPL110C CDA1Q06702 301 aa4.31□□□□□ -1.72
GDE1YPL110C ARO3P14843 370 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C VPS33P20795 691 aa4.31□□□□□ -1.72
GDE1YPL110C GPI10P30777 616 aa4.31□□□□□ -1.72
GDE1YPL110C VMA5P31412 392 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C ABD1P32783 436 aaPredicted RBP4.31□□□□□ -1.72
GDE1YPL110C PDR3P33200 976 aa4.31□□□□□ -1.72
GDE1YPL110C YBP1P38315 674 aa4.31□□□□□ -1.72
GDE1YPL110C POP4P38336 279 aa4.31□□□□□ -1.72
GDE1YPL110C YIR035CP40579 254 aa4.31□□□□□ -1.72
GDE1YPL110C OPT1P40897 799 aa4.31□□□□□ -1.72
GDE1YPL110C CTL1Q03220 320 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C YNG1Q08465 219 aa4.31□□□□□ -1.72
GDE1YPL110C YOR238WQ08634 303 aa4.31□□□□□ -1.72
GDE1YPL110C AFI1Q99222 893 aa4.31□□□□□ -1.72
GDE1YPL110C RPL22AP05749 121 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C QCR2P07257 368 aa4.31□□□□□ -1.72
GDE1YPL110C YFR010W-AP0C5N0 62 aa4.31□□□□□ -1.72
GDE1YPL110C SBA1P28707 216 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C MRPL9P31334 269 aa4.31□□□□□ -1.72
GDE1YPL110C YPT31P38555 223 aaKnown RBP4.31□□□□□ -1.72
GDE1YPL110C AIM46P38885 310 aa4.31□□□□□ -1.72
GDE1YPL110C SEO1P39709 593 aa4.31□□□□□ -1.72
GDE1YPL110C PHM8P40025 321 aa4.31□□□□□ -1.72
GDE1YPL110C GIP2P40036 548 aa4.31□□□□□ -1.72
GDE1YPL110C YJL068CP40363 299 aa4.31□□□□□ -1.72
GDE1YPL110C CHS6P40955 746 aa4.31□□□□□ -1.72
GDE1YPL110C NMA2P53204 395 aa4.31□□□□□ -1.72
GDE1YPL110C EOS1P53938 366 aa4.31□□□□□ -1.72
GDE1YPL110C YDC1Q02896 317 aa4.31□□□□□ -1.72
GDE1YPL110C AGE1Q04412 482 aa4.31□□□□□ -1.72
GDE1YPL110C APC4Q04601 652 aa4.31□□□□□ -1.72
GDE1YPL110C HBN1Q96VH4 193 aa4.31□□□□□ -1.72
GDE1YPL110C HKR1P41809 1802 aa4.3□□□□□ -1.72
GDE1YPL110C PHR1P05066 565 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
GDE1YPL110C SEC59P20048 519 aa4.3□□□□□ -1.72
GDE1YPL110C MRPL32P25348 183 aa4.3□□□□□ -1.72
GDE1YPL110C GPT2P36148 743 aa4.3□□□□□ -1.72
GDE1YPL110C YCR087C-AP37263 153 aa4.3□□□□□ -1.72
GDE1YPL110C SHM2P37291 469 aaKnown RBP4.3□□□□□ -1.72
GDE1YPL110C RIB5P38145 238 aa4.3□□□□□ -1.72
GDE1YPL110C SLM4P38247 162 aa4.3□□□□□ -1.72
GDE1YPL110C PSF2P40359 213 aa4.3□□□□□ -1.72
GDE1YPL110C UBP7P40453 1071 aa4.3□□□□□ -1.72
GDE1YPL110C FET4P40988 552 aa4.3□□□□□ -1.72
GDE1YPL110C YAE1P47118 141 aaPredicted RBP4.3□□□□□ -1.72
GDE1YPL110C TEP1P53916 434 aa4.3□□□□□ -1.72
GDE1YPL110C ARK1P53974 638 aa4.3□□□□□ -1.72
GDE1YPL110C ADI1Q03677 179 aa4.3□□□□□ -1.72
GDE1YPL110C TVP18Q04767 167 aa4.3□□□□□ -1.72
GDE1YPL110C MDM30Q05930 598 aa4.3□□□□□ -1.72
GDE1YPL110C ERG20P08524 352 aaKnown RBP4.3□□□□□ -1.72
GDE1YPL110C RPL31AP0C2H8 113 aaKnown RBP4.3□□□□□ -1.72
GDE1YPL110C RPL31BP0C2H9 113 aaKnown RBP4.3□□□□□ -1.72
GDE1YPL110C RPS6AP0CX37 236 aaKnown RBP4.3□□□□□ -1.72
GDE1YPL110C RPS6BP0CX38 236 aaPredicted RBP4.3□□□□□ -1.72
GDE1YPL110C RER1P25560 188 aa4.3□□□□□ -1.72
GDE1YPL110C VBA3P25594 458 aa4.3□□□□□ -1.72
GDE1YPL110C ARE1P25628 610 aa4.3□□□□□ -1.72
GDE1YPL110C NGG1P32494 702 aa4.3□□□□□ -1.72
GDE1YPL110C YBR284WP38150 797 aa4.3□□□□□ -1.72
GDE1YPL110C SHG1P38337 142 aa4.3□□□□□ -1.72
GDE1YPL110C UIP3P39547 235 aa4.3□□□□□ -1.72
GDE1YPL110C MRPL13Q02204 264 aa4.3□□□□□ -1.72
GDE1YPL110C ROY1Q04847 553 aa4.3□□□□□ -1.72
GDE1YPL110C ERF2Q06551 359 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms