RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YER079WP40052 210 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W YIL067CP40514 678 aa2.17□□□□□ -2.06
BRO1YPL084W PEX25Q02969 394 aa2.17□□□□□ -2.06
BRO1YPL084W YMR181CQ03231 154 aa2.17□□□□□ -2.06
BRO1YPL084W PPM1Q04081 328 aa2.17□□□□□ -2.06
BRO1YPL084W URH1Q04179 340 aa2.17□□□□□ -2.06
BRO1YPL084W YDR341CQ05506 607 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W YTH1Q06102 208 aaPredicted RBP2.17□□□□□ -2.06
BRO1YPL084W IMA2Q08295 589 aa2.17□□□□□ -2.06
BRO1YPL084W SNX3Q08826 162 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W YLR108CQ12259 485 aa2.17□□□□□ -2.06
BRO1YPL084W ATG34Q12292 412 aa2.17□□□□□ -2.06
BRO1YPL084W RRP12Q12754 1228 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W SPS22P25380 463 aa2.16□□□□□ -2.06
BRO1YPL084W DPH2P32461 534 aa2.16□□□□□ -2.06
BRO1YPL084W KKQ8P36004 724 aa2.16□□□□□ -2.06
BRO1YPL084W PFF1P38244 976 aa2.16□□□□□ -2.06
BRO1YPL084W STN1P38960 494 aa2.16□□□□□ -2.06
BRO1YPL084W YPS6P40583 537 aa2.16□□□□□ -2.06
BRO1YPL084W YER078W-AQ3E7A2 54 aa2.16□□□□□ -2.06
BRO1YPL084W CDC21P06785 304 aa2.16□□□□□ -2.06
BRO1YPL084W NAT1P12945 854 aaKnown RBP2.16□□□□□ -2.06
BRO1YPL084W RGT1P32862 1170 aa2.16□□□□□ -2.06
BRO1YPL084W GPI16P38875 610 aa2.16□□□□□ -2.06
BRO1YPL084W WWM1P43582 211 aaKnown RBP2.16□□□□□ -2.06
BRO1YPL084W NCA3P46955 337 aa2.16□□□□□ -2.06
BRO1YPL084W AZR1P50080 613 aa2.16□□□□□ -2.06
BRO1YPL084W ROG1P53118 685 aa2.16□□□□□ -2.06
BRO1YPL084W CPR4P25334 318 aa2.15□□□□□ -2.07
BRO1YPL084W PHO91P27514 894 aa2.15□□□□□ -2.07
BRO1YPL084W HSP104P31539 908 aaKnown RBP2.15□□□□□ -2.07
BRO1YPL084W YBR137WP38276 179 aa2.15□□□□□ -2.07
BRO1YPL084W MTC6P38849 526 aa2.15□□□□□ -2.07
BRO1YPL084W BRO1P48582 844 aa2.15□□□□□ -2.07
BRO1YPL084W STD1Q02794 444 aa2.15□□□□□ -2.07
BRO1YPL084W MMT1Q03218 510 aa2.15□□□□□ -2.07
BRO1YPL084W SRL2Q12020 392 aa2.15□□□□□ -2.07
BRO1YPL084W DST1P07273 309 aa2.15□□□□□ -2.07
BRO1YPL084W NFT1P0CE68 1218 aa2.15□□□□□ -2.07
BRO1YPL084W CPR3P25719 182 aa2.15□□□□□ -2.07
BRO1YPL084W STP2P38704 541 aa2.15□□□□□ -2.07
BRO1YPL084W INM1P38710 295 aa2.15□□□□□ -2.07
BRO1YPL084W SMA2Q04658 369 aa2.15□□□□□ -2.07
BRO1YPL084W RRP9Q06506 573 aaKnown RBP2.15□□□□□ -2.07
BRO1YPL084W ESA1Q08649 445 aa2.15□□□□□ -2.07
BRO1YPL084W APE4P38821 490 aa2.14□□□□□ -2.07
BRO1YPL084W CCT4P39078 528 aaKnown RBP2.14□□□□□ -2.07
BRO1YPL084W CHS6P40955 746 aa2.14□□□□□ -2.07
BRO1YPL084W BOR1P53838 576 aa2.14□□□□□ -2.07
BRO1YPL084W IMP4P53941 290 aaKnown RBP2.14□□□□□ -2.07
BRO1YPL084W MEH1Q02205 184 aa2.14□□□□□ -2.07
BRO1YPL084W TSR1Q07381 788 aaKnown RBP2.14□□□□□ -2.07
BRO1YPL084W RUP1Q12242 671 aa2.14□□□□□ -2.07
BRO1YPL084W FRE6Q12473 712 aa2.14□□□□□ -2.07
BRO1YPL084W PUP2P32379 260 aa2.14□□□□□ -2.07
BRO1YPL084W VPH1P32563 840 aaKnown RBP2.14□□□□□ -2.07
BRO1YPL084W MUD1P32605 298 aaKnown RBP2.14□□□□□ -2.07
BRO1YPL084W NRP1P32770 719 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
BRO1YPL084W YKL097CP34245 136 aa2.14□□□□□ -2.07
BRO1YPL084W QDR3P38227 689 aa2.14□□□□□ -2.07
BRO1YPL084W MLC1P53141 149 aa2.14□□□□□ -2.07
BRO1YPL084W TOF1P53840 1238 aa2.14□□□□□ -2.07
BRO1YPL084W BCH1Q05029 724 aa2.14□□□□□ -2.07
BRO1YPL084W NSE1Q07913 336 aa2.14□□□□□ -2.07
BRO1YPL084W YSC83P32792 385 aa2.13□□□□□ -2.07
BRO1YPL084W SKN1P33336 771 aa2.13□□□□□ -2.07
BRO1YPL084W YBR139WP38109 508 aa2.13□□□□□ -2.07
BRO1YPL084W NDT80P38830 627 aa2.13□□□□□ -2.07
BRO1YPL084W MLH1P38920 769 aa2.13□□□□□ -2.07
BRO1YPL084W PRM5P40476 318 aa2.13□□□□□ -2.07
BRO1YPL084W SFH5P47008 294 aa2.13□□□□□ -2.07
BRO1YPL084W YIP5P53108 310 aa2.13□□□□□ -2.07
BRO1YPL084W CCE1Q03702 353 aa2.13□□□□□ -2.07
BRO1YPL084W RRN11Q04712 507 aa2.13□□□□□ -2.07
BRO1YPL084W PBA1Q05778 276 aa2.13□□□□□ -2.07
BRO1YPL084W NDL1Q06568 189 aa2.13□□□□□ -2.07
BRO1YPL084W YOR387CQ08910 206 aa2.13□□□□□ -2.07
BRO1YPL084W TPT1Q12272 230 aaKnown RBP2.13□□□□□ -2.07
BRO1YPL084W DEG1P31115 442 aaKnown RBP2.13□□□□□ -2.07
BRO1YPL084W SDH3P33421 198 aa2.13□□□□□ -2.07
BRO1YPL084W YBL059WP34224 193 aa2.13□□□□□ -2.07
BRO1YPL084W ATP3P38077 311 aaKnown RBP2.13□□□□□ -2.07
BRO1YPL084W WSS1P38838 269 aa2.13□□□□□ -2.07
BRO1YPL084W MNL1P38888 796 aa2.13□□□□□ -2.07
BRO1YPL084W EPL1P43572 832 aa2.13□□□□□ -2.07
BRO1YPL084W MDG1P53885 366 aa2.13□□□□□ -2.07
BRO1YPL084W YPL107WQ02873 248 aa2.13□□□□□ -2.07
BRO1YPL084W ELP3Q02908 557 aaKnown RBP2.13□□□□□ -2.07
BRO1YPL084W YDR541CQ03049 344 aa2.13□□□□□ -2.07
BRO1YPL084W ECM7Q06200 448 aa2.13□□□□□ -2.07
BRO1YPL084W YRM1Q12340 786 aa2.13□□□□□ -2.07
BRO1YPL084W OPI3P05375 206 aa2.12□□□□□ -2.07
BRO1YPL084W RPL6BP05739 176 aaKnown RBP2.12□□□□□ -2.07
BRO1YPL084W YCL068CP25593 260 aa2.12□□□□□ -2.07
BRO1YPL084W MMF1P40185 145 aaKnown RBP2.12□□□□□ -2.07
BRO1YPL084W JLP2P40206 208 aa2.12□□□□□ -2.07
BRO1YPL084W SIM1P40472 476 aa2.12□□□□□ -2.07
BRO1YPL084W TOS3P43637 560 aa2.12□□□□□ -2.07
BRO1YPL084W EOS1P53938 366 aa2.12□□□□□ -2.07
BRO1YPL084W RPL6AQ02326 176 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms