RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C VPS52P39904 641 aa7.49□□□□□ -1.21
LSP1YPL004C HPM1P40481 377 aa7.49□□□□□ -1.21
LSP1YPL004C YMR210WQ03649 449 aa7.49□□□□□ -1.21
LSP1YPL004C YPR174CQ06616 221 aaPredicted RBP7.49□□□□□ -1.21
LSP1YPL004C COS7Q07788 383 aa7.49□□□□□ -1.21
LSP1YPL004C REX3Q12090 404 aa7.49□□□□□ -1.21
LSP1YPL004C YKL033W-AQ86ZR7 236 aa7.49□□□□□ -1.21
LSP1YPL004C YOR019WQ99248 730 aa7.49□□□□□ -1.21
LSP1YPL004C GLK1P17709 500 aaKnown RBP7.48□□□□□ -1.21
LSP1YPL004C RPB5P20434 215 aa7.48□□□□□ -1.21
LSP1YPL004C NAR1P23503 491 aaKnown RBP7.48□□□□□ -1.21
LSP1YPL004C STP22P25604 385 aa7.48□□□□□ -1.21
LSP1YPL004C PTR2P32901 601 aa7.48□□□□□ -1.21
LSP1YPL004C MSN2P33748 704 aa7.48□□□□□ -1.21
LSP1YPL004C GIP2P40036 548 aa7.48□□□□□ -1.21
LSP1YPL004C UBC9P50623 157 aaPredicted RBP7.48□□□□□ -1.21
LSP1YPL004C CDH1P53197 566 aa7.48□□□□□ -1.21
LSP1YPL004C NNF2P53253 936 aa7.48□□□□□ -1.21
LSP1YPL004C GTR1Q00582 310 aa7.48□□□□□ -1.21
LSP1YPL004C DFG5Q05031 458 aa7.48□□□□□ -1.21
LSP1YPL004C YPR172WQ06608 200 aa7.48□□□□□ -1.21
LSP1YPL004C YOL024WQ08172 172 aa7.48□□□□□ -1.21
LSP1YPL004C GPN2Q08726 347 aaPredicted RBP7.48□□□□□ -1.21
LSP1YPL004C MUM3Q08750 479 aa7.48□□□□□ -1.21
LSP1YPL004C SAN1P22470 610 aa7.47□□□□□ -1.21
LSP1YPL004C BUD14P27637 709 aa7.47□□□□□ -1.21
LSP1YPL004C ATP7P30902 174 aa7.47□□□□□ -1.21
LSP1YPL004C AUR1P36107 401 aaPredicted RBP7.47□□□□□ -1.21
LSP1YPL004C YHR177WP38867 453 aa7.47□□□□□ -1.21
LSP1YPL004C MNN9P39107 395 aaKnown RBP7.47□□□□□ -1.21
LSP1YPL004C UTP25P40498 721 aaKnown RBP7.47□□□□□ -1.21
LSP1YPL004C IKS1P47042 667 aa7.47□□□□□ -1.21
LSP1YPL004C PAC10P48363 199 aa7.47□□□□□ -1.21
LSP1YPL004C RAD33Q04231 177 aa7.47□□□□□ -1.21
LSP1YPL004C MDM30Q05930 598 aa7.47□□□□□ -1.21
LSP1YPL004C MFG1Q07684 458 aa7.47□□□□□ -1.21
LSP1YPL004C BDS1Q08347 646 aa7.47□□□□□ -1.21
LSP1YPL004C OSW1Q08692 278 aa7.47□□□□□ -1.21
LSP1YPL004C FDH1Q08911 376 aa7.47□□□□□ -1.21
LSP1YPL004C TRA1P38811 3744 aa7.47□□□□□ -1.21
LSP1YPL004C ATP2P00830 511 aaKnown RBP7.46□□□□□ -1.22
LSP1YPL004C UGA1P17649 471 aa7.46□□□□□ -1.22
LSP1YPL004C AAC3P18238 307 aa7.46□□□□□ -1.22
LSP1YPL004C SEC62P21825 274 aa7.46□□□□□ -1.22
LSP1YPL004C SPC42P36094 363 aa7.46□□□□□ -1.22
LSP1YPL004C ALG3P38179 458 aa7.46□□□□□ -1.22
LSP1YPL004C IFA38P38286 347 aa7.46□□□□□ -1.22
LSP1YPL004C FZO1P38297 855 aa7.46□□□□□ -1.22
LSP1YPL004C TRR2P38816 342 aa7.46□□□□□ -1.22
LSP1YPL004C YJL068CP40363 299 aa7.46□□□□□ -1.22
LSP1YPL004C LYS12P40495 371 aaKnown RBP7.46□□□□□ -1.22
LSP1YPL004C BAP3P41815 604 aa7.46□□□□□ -1.22
LSP1YPL004C KEL2P50090 882 aa7.46□□□□□ -1.22
LSP1YPL004C SPT20P50875 604 aa7.46□□□□□ -1.22
LSP1YPL004C ROM1P53046 1155 aa7.46□□□□□ -1.22
LSP1YPL004C YDR476CQ03362 224 aa7.46□□□□□ -1.22
LSP1YPL004C SMA2Q04658 369 aa7.46□□□□□ -1.22
LSP1YPL004C YPR091CQ06833 770 aa7.46□□□□□ -1.22
LSP1YPL004C YLR036CQ07986 203 aa7.46□□□□□ -1.22
LSP1YPL004C YOR365CQ08844 703 aa7.46□□□□□ -1.22
LSP1YPL004C AKR2Q12013 749 aa7.46□□□□□ -1.22
LSP1YPL004C BSC1Q12140 328 aa7.46□□□□□ -1.22
LSP1YPL004C MEC1P38111 2368 aa7.46□□□□□ -1.22
LSP1YPL004C THP2O13539 261 aaKnown RBP7.45□□□□□ -1.22
LSP1YPL004C HTA1P04911 132 aaKnown RBP7.45□□□□□ -1.22
LSP1YPL004C PDB1P32473 366 aaKnown RBP7.45□□□□□ -1.22
LSP1YPL004C SSE1P32589 693 aaKnown RBP7.45□□□□□ -1.22
LSP1YPL004C ATG14P38270 344 aa7.45□□□□□ -1.22
LSP1YPL004C RCK1P38622 512 aa7.45□□□□□ -1.22
LSP1YPL004C FAD1P38913 306 aa7.45□□□□□ -1.22
LSP1YPL004C MTW1P39731 289 aa7.45□□□□□ -1.22
LSP1YPL004C RIC1P40395 1056 aa7.45□□□□□ -1.22
LSP1YPL004C CUP9P41817 306 aa7.45□□□□□ -1.22
LSP1YPL004C ALB1P47019 175 aaPredicted RBP7.45□□□□□ -1.22
LSP1YPL004C OCA1P50946 238 aaPredicted RBP7.45□□□□□ -1.22
LSP1YPL004C MAL11P53048 616 aa7.45□□□□□ -1.22
LSP1YPL004C HOS2P53096 452 aaPredicted RBP7.45□□□□□ -1.22
LSP1YPL004C RNH70P53331 553 aa7.45□□□□□ -1.22
LSP1YPL004C REH1Q06709 432 aa7.45□□□□□ -1.22
LSP1YPL004C RAX1Q08760 435 aa7.45□□□□□ -1.22
LSP1YPL004C PAR32Q12515 295 aaKnown RBP7.45□□□□□ -1.22
LSP1YPL004C RPP2BP02400 110 aaKnown RBP7.44□□□□□ -1.22
LSP1YPL004C PMR1P13586 950 aa7.44□□□□□ -1.22
LSP1YPL004C MEF1P25039 761 aa7.44□□□□□ -1.22
LSP1YPL004C BET3P36149 193 aa7.44□□□□□ -1.22
LSP1YPL004C YBR139WP38109 508 aa7.44□□□□□ -1.22
LSP1YPL004C TIF11P38912 153 aaKnown RBP7.44□□□□□ -1.22
LSP1YPL004C SER3P40054 469 aa7.44□□□□□ -1.22
LSP1YPL004C MRPS18P42847 217 aa7.44□□□□□ -1.22
LSP1YPL004C RPS12P48589 143 aaKnown RBP7.44□□□□□ -1.22
LSP1YPL004C YNL033WP53964 284 aa7.44□□□□□ -1.22
LSP1YPL004C YNL019CP53975 284 aa7.44□□□□□ -1.22
LSP1YPL004C SUR7P54003 302 aa7.44□□□□□ -1.22
LSP1YPL004C SVL3Q03088 825 aaKnown RBP7.44□□□□□ -1.22
LSP1YPL004C ATG38Q05789 226 aaKnown RBP7.44□□□□□ -1.22
LSP1YPL004C ATG26Q06321 1198 aa7.44□□□□□ -1.22
LSP1YPL004C BCP1Q06338 283 aa7.44□□□□□ -1.22
LSP1YPL004C MSL5Q12186 476 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
LSP1YPL004C TPO4Q12256 659 aa7.44□□□□□ -1.22
LSP1YPL004C SKS1Q12505 502 aa7.44□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms