RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTS1	YOR359W	YEL025C	P39991	1188 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	PCL6	P40038	420 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	HXT14	P42833	540 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	HXT10	P43581	546 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	SNG1	P46950	547 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	AMA1	P50082	593 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	YML6	P51998	286 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	YGR127W	P53275	312 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
VTS1	YOR359W	ARE2	P53629	642 aa	Known RBP	6.56	□□□□□ -1.36
VTS1	YOR359W	KTR5	P53966	522 aa	Predicted RBP	6.56	□□□□□ -1.36
VTS1	YOR359W	HXT11	P54862	567 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	YPL107W	Q02873	248 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	TRS130	Q03660	1102 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	YLR283W	Q05867	314 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	KEL3	Q08979	651 aa	Predicted RBP	6.56	□□□□□ -1.36
VTS1	YOR359W	RRP42	Q12277	265 aa	Predicted RBP	6.56	□□□□□ -1.36
VTS1	YOR359W	EFG1	Q3E705	233 aa	Known RBP	6.56	□□□□□ -1.36
VTS1	YOR359W	YOR019W	Q99248	730 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	Q0144	Q9ZZW2	109 aa		6.56	□□□□□ -1.36
VTS1	YOR359W	TRP4	P07285	380 aa	Predicted RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	RNR1	P21524	888 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	KAR4	P25583	335 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	IMG1	P25626	169 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	HIS7	P33734	552 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	RRT2	P38332	387 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	LAG1	P38703	411 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	SNN1	P48232	102 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	YGL039W	P53183	348 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	JAC1	P53193	184 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	YGR017W	P53210	297 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	RPT4	P53549	437 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	MRPL22	P53881	309 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	IDP3	P53982	420 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	ERV25	P54837	211 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	YMR265C	Q03508	461 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	TDA1	Q03533	586 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	SNU56	Q03782	492 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	TPP1	Q03796	238 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	YLR224W	Q05947	369 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	ADY4	Q05955	493 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	EST2	Q06163	884 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	OPT2	Q06593	877 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	YPL199C	Q08954	240 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	SLF1	Q12034	447 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	SFM1	Q12314	213 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	YOP1	Q12402	180 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	LPX1	Q12405	387 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	TMA7	Q3E764	64 aa	Known RBP	6.55	□□□□□ -1.36
VTS1	YOR359W	RGS2	Q99188	309 aa		6.55	□□□□□ -1.36
VTS1	YOR359W	TCP1	P12612	559 aa	Known RBP	6.54	□□□□□ -1.36
VTS1	YOR359W	MIP1	P15801	1254 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	MET16	P18408	261 aa	Predicted RBP	6.54	□□□□□ -1.36
VTS1	YOR359W	RPL24B	P24000	155 aa	Known RBP	6.54	□□□□□ -1.36
VTS1	YOR359W	ADP1	P25371	1049 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	YCL049C	P25577	312 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	PRO3	P32263	286 aa	Known RBP	6.54	□□□□□ -1.36
VTS1	YOR359W	SSH4	P32343	579 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	YSC84	P32793	468 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	PDC2	P32896	925 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	SOF1	P33750	489 aa	Known RBP	6.54	□□□□□ -1.36
VTS1	YOR359W	SSS1	P35179	80 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	ERG7	P38604	731 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	YGR201C	P42936	225 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	MRX6	P48564	524 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	YDR109C	Q04585	715 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	TMA10	Q06177	86 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	YPR127W	Q06494	345 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	HDA2	Q06629	674 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	CYK3	Q07533	885 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	PCD1	Q12524	340 aa		6.54	□□□□□ -1.36
VTS1	YOR359W	GAL80	P04387	435 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	ARG80	P07249	177 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	ATP1	P07251	545 aa	Known RBP	6.53	□□□□□ -1.36
VTS1	YOR359W	CIT2	P08679	460 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	SLY41	P22215	453 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	MRPL9	P31334	269 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	DAL1	P32375	460 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	BIO2	P32451	375 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	PGM1	P33401	570 aa	Known RBP	6.53	□□□□□ -1.36
VTS1	YOR359W	HIS2	P38635	335 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	MSC7	P38694	644 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	CRG1	P38892	291 aa	RIP-Chip data	6.53	□□□□□ -1.36	not detected
VTS1	YOR359W	YEN1	P40028	759 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	PGD1	P40356	397 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	QDR1	P40475	563 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	HIS6	P40545	261 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	PFA3	P42836	336 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	YGL204C	P53089	101 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	MRH4	P53166	561 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	YNR061C	P53747	219 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	RHO3	Q00245	231 aa	Known RBP	6.53	□□□□□ -1.36
VTS1	YOR359W	MRPS16	Q02608	121 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	TRS31	Q03337	283 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	HOF1	Q05080	669 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	GUP2	Q08929	609 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	CSM4	Q08955	156 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	PKH2	Q12236	1081 aa	Known RBP	6.53	□□□□□ -1.36
VTS1	YOR359W	RRD2	Q12461	358 aa		6.53	□□□□□ -1.36
VTS1	YOR359W	PRE1	P22141	198 aa	Known RBP	6.52	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms