RNA–Protein interactions for RNA: YOL042W

NGL1, Transcript of Putative endonuclease, yeast

Gene NGL1, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGL1	YOL042W	NBL1	Q3E7Y6	73 aa		2.69	□□□□□ -1.98
NGL1	YOL042W	HIS4	P00815	799 aa	Known RBP	2.68	□□□□□ -1.98
NGL1	YOL042W	CDC21	P06785	304 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	IMA3	P0CW40	589 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	IMA4	P0CW41	589 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	RAD57	P25301	460 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	RDS1	P25611	832 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	ERG1	P32476	496 aa	Known RBP	2.68	□□□□□ -1.98
NGL1	YOL042W	CYS4	P32582	507 aa	Known RBP	2.68	□□□□□ -1.98
NGL1	YOL042W	SRB2	P34162	210 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	FRE2	P36033	711 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	MIC60	P36112	540 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	YCR041W	P37265	110 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	PCH2	P38126	564 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	SPP381	P38282	291 aa	Predicted RBP	2.68	□□□□□ -1.98
NGL1	YOL042W	MSG5	P38590	489 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	INM1	P38710	295 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	YAL037W	P39728	267 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	YIR014W	P40570	242 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	RPA34	P47006	233 aa	Predicted RBP	2.68	□□□□□ -1.98
NGL1	YOL042W	HMS2	P47175	358 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	YIP1	P53039	248 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	GPI15	P53961	229 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	IRC15	Q02733	499 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	MRPL51	Q06090	140 aa	Predicted RBP	2.68	□□□□□ -1.98
NGL1	YOL042W	NSE1	Q07913	336 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	IMA2	Q08295	589 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	RTC5	Q12108	567 aa	Known RBP	2.68	□□□□□ -1.98
NGL1	YOL042W	YLL056C	Q12177	298 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	YDL009C	Q12210	107 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	RUP1	Q12242	671 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	MDY2	Q12285	212 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	ORT1	Q12375	292 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	SRN2	Q99176	213 aa		2.68	□□□□□ -1.98
NGL1	YOL042W	EXO70	P19658	623 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	SAG1	P20840	650 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	PTK1	P36002	662 aa	Predicted RBP	2.67	□□□□□ -1.98
NGL1	YOL042W	KAP104	P38217	918 aa	Known RBP	2.67	□□□□□ -1.98
NGL1	YOL042W	YHR177W	P38867	453 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	LYS1	P38998	373 aa	RIP-Chip data	2.67	□□□□□ -1.98	RIP-Chip
NGL1	YOL042W	YER079W	P40052	210 aa	Known RBP	2.67	□□□□□ -1.98
NGL1	YOL042W	PHB2	P50085	310 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	YGL082W	P53155	381 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	MPS2	P53159	387 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	ARK1	P53974	638 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	PNG1	Q02890	363 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	ADD37	Q03233	198 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	ABZ2	Q03266	374 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	PRP3	Q03338	469 aa	Predicted RBP	2.67	□□□□□ -1.98
NGL1	YOL042W	YDR415C	Q04033	374 aa	Predicted RBP	2.67	□□□□□ -1.98
NGL1	YOL042W	URH1	Q04179	340 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	ECM7	Q06200	448 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	RNH203	Q12338	110 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	YOR012W	Q12351	137 aa		2.67	□□□□□ -1.98
NGL1	YOL042W	GLN3	P18494	730 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	YCR100C	P25606	316 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	YCR022C	P25620	114 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	PSO2	P30620	661 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	SIP2	P34164	415 aa	Known RBP	2.66	□□□□□ -1.98
NGL1	YOL042W	YNK1	P36010	153 aa	Known RBP	2.66	□□□□□ -1.98
NGL1	YOL042W	YDR089W	P38966	869 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	PAC11	P40960	533 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	BRO1	P48582	844 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	PMT5	P52867	743 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	FRE4	P53746	719 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	PRM1	P53835	661 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	RRP9	Q06506	573 aa	Known RBP	2.66	□□□□□ -1.98
NGL1	YOL042W	YEH2	Q07950	538 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	REX4	Q08237	289 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	BSC6	Q08280	497 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	YPR022C	Q12139	1133 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	ATG34	Q12292	412 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	RMD5	Q12508	421 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	CSR2	Q12734	1121 aa		2.66	□□□□□ -1.98
NGL1	YOL042W	OPI3	P05375	206 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	DST1	P07273	309 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	RPC40	P07703	335 aa	Known RBP	2.65	□□□□□ -1.99
NGL1	YOL042W	YAR066W	P0CX18	203 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	YHR214W	P0CX19	203 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	SPO12	P17123	173 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	YKL097C	P34245	136 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	RSM22	P36056	628 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	RRP3	P38712	501 aa	Known RBP	2.65	□□□□□ -1.99
NGL1	YOL042W	GCD10	P41814	478 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	GWT1	P47026	490 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	RTT102	P53330	157 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	HST1	P53685	503 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	ERV25	P54837	211 aa	Known RBP	2.65	□□□□□ -1.99
NGL1	YOL042W	STD1	Q02794	444 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	RSN1	Q03516	953 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	URC2	Q04411	772 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	VPS74	Q06385	345 aa		2.65	□□□□□ -1.99
NGL1	YOL042W	SKI7	Q08491	747 aa	Predicted RBP	2.65	□□□□□ -1.99
NGL1	YOL042W	RPL12A	P0CX53	165 aa	Known RBP	2.64	□□□□□ -1.99
NGL1	YOL042W	RPL12B	P0CX54	165 aa		2.64	□□□□□ -1.99
NGL1	YOL042W	DBP3	P20447	523 aa	Known RBP	2.64	□□□□□ -1.99
NGL1	YOL042W	LSB5	P25369	354 aa		2.64	□□□□□ -1.99
NGL1	YOL042W	ITR1	P30605	584 aa		2.64	□□□□□ -1.99
NGL1	YOL042W	PPQ1	P32945	549 aa		2.64	□□□□□ -1.99
NGL1	YOL042W	SKN1	P33336	771 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms