RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C EMC3P36039 253 aa8.24□□□□□ -1.09
RPD3YNL330C IPI1P38803 334 aaPredicted RBP8.24□□□□□ -1.09
RPD3YNL330C PCL6P40038 420 aa8.24□□□□□ -1.09
RPD3YNL330C BUR6P40096 142 aa8.24□□□□□ -1.09
RPD3YNL330C SER33P40510 469 aa8.24□□□□□ -1.09
RPD3YNL330C SER2P42941 309 aa8.24□□□□□ -1.09
RPD3YNL330C STE24P47154 453 aa8.24□□□□□ -1.09
RPD3YNL330C GAD1Q04792 585 aa8.24□□□□□ -1.09
RPD3YNL330C ATG29Q12092 213 aa8.24□□□□□ -1.09
RPD3YNL330C PER33Q12144 273 aa8.24□□□□□ -1.09
RPD3YNL330C NFI1Q12216 726 aa8.24□□□□□ -1.09
RPD3YNL330C HSP42Q12329 375 aa8.24□□□□□ -1.09
RPD3YNL330C MRX4Q12467 430 aa8.24□□□□□ -1.09
RPD3YNL330C LEU4P06208 619 aaKnown RBP8.23□□□□□ -1.09
RPD3YNL330C STF2P16965 84 aa8.23□□□□□ -1.09
RPD3YNL330C DBF2P22204 572 aa8.23□□□□□ -1.09
RPD3YNL330C RPS1BP23248 255 aaKnown RBP8.23□□□□□ -1.09
RPD3YNL330C TRX3P25372 127 aa8.23□□□□□ -1.09
RPD3YNL330C ARO7P32178 256 aa8.23□□□□□ -1.09
RPD3YNL330C SPT14P32363 452 aa8.23□□□□□ -1.09
RPD3YNL330C MUM2P38236 366 aa8.23□□□□□ -1.09
RPD3YNL330C YHK8P38776 514 aa8.23□□□□□ -1.09
RPD3YNL330C YEL073CP39974 107 aa8.23□□□□□ -1.09
RPD3YNL330C LSM5P40089 93 aaKnown RBP8.23□□□□□ -1.09
RPD3YNL330C YFR018CP43599 363 aa8.23□□□□□ -1.09
RPD3YNL330C EMC4P53073 190 aa8.23□□□□□ -1.09
RPD3YNL330C ABZ2Q03266 374 aa8.23□□□□□ -1.09
RPD3YNL330C ARX1Q03862 593 aaKnown RBP8.23□□□□□ -1.09
RPD3YNL330C RRP45Q05636 305 aaKnown RBP8.23□□□□□ -1.09
RPD3YNL330C YPQ2Q06328 317 aa8.23□□□□□ -1.09
RPD3YNL330C OPT2Q06593 877 aa8.23□□□□□ -1.09
RPD3YNL330C SIA1Q12212 622 aa8.23□□□□□ -1.09
RPD3YNL330C AIR2Q12476 344 aaKnown RBP8.23□□□□□ -1.09
RPD3YNL330C TY2A-LR1P0C2J4 438 aa8.22□□□□□ -1.09
RPD3YNL330C TY2A-FP0CX61 438 aa8.22□□□□□ -1.09
RPD3YNL330C TY2A-GR2P0CX62 438 aa8.22□□□□□ -1.09
RPD3YNL330C BUD5P25300 642 aaPredicted RBP8.22□□□□□ -1.09
RPD3YNL330C TY2A-CP25383 438 aa8.22□□□□□ -1.09
RPD3YNL330C IDH1P28834 360 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
RPD3YNL330C CTS1P29029 562 aa8.22□□□□□ -1.09
RPD3YNL330C GMH1P36125 273 aa8.22□□□□□ -1.09
RPD3YNL330C IML3P38265 245 aa8.22□□□□□ -1.09
RPD3YNL330C YTA6P40328 754 aa8.22□□□□□ -1.09
RPD3YNL330C JHD2P47156 728 aaPredicted RBP8.22□□□□□ -1.09
RPD3YNL330C HMS2P47175 358 aa8.22□□□□□ -1.09
RPD3YNL330C RTS3P53289 263 aa8.22□□□□□ -1.09
RPD3YNL330C ZRG17P53735 605 aa8.22□□□□□ -1.09
RPD3YNL330C TY2A-DR2Q03483 438 aa8.22□□□□□ -1.09
RPD3YNL330C SWF1Q04629 336 aa8.22□□□□□ -1.09
RPD3YNL330C COA4Q05809 96 aa8.22□□□□□ -1.09
RPD3YNL330C YLR446WQ06204 433 aa8.22□□□□□ -1.09
RPD3YNL330C YLR036CQ07986 203 aa8.22□□□□□ -1.09
RPD3YNL330C DIN7Q12086 430 aa8.22□□□□□ -1.09
RPD3YNL330C TY2A-BQ12260 438 aa8.22□□□□□ -1.09
RPD3YNL330C TY2A-OR2Q12293 438 aa8.22□□□□□ -1.09
RPD3YNL330C TY2A-DR1Q12392 438 aa8.22□□□□□ -1.09
RPD3YNL330C TY2A-OR1Q12439 438 aa8.22□□□□□ -1.09
RPD3YNL330C TY2A-DR3Q99303 438 aa8.22□□□□□ -1.09
RPD3YNL330C GPM1P00950 247 aaKnown RBP8.21□□□□□ -1.1
RPD3YNL330C ADE5,7P07244 802 aaKnown RBP8.21□□□□□ -1.1
RPD3YNL330C FUM1P08417 488 aaKnown RBP8.21□□□□□ -1.1
RPD3YNL330C PEX34P25584 144 aa8.21□□□□□ -1.1
RPD3YNL330C GSH1P32477 678 aa8.21□□□□□ -1.1
RPD3YNL330C STE5P32917 917 aa8.21□□□□□ -1.1
RPD3YNL330C CBP4P37267 147 aa8.21□□□□□ -1.1
RPD3YNL330C ATG14P38270 344 aa8.21□□□□□ -1.1
RPD3YNL330C MDM31P38880 579 aa8.21□□□□□ -1.1
RPD3YNL330C FAF1P40546 346 aaPredicted RBP8.21□□□□□ -1.1
RPD3YNL330C PFA3P42836 336 aa8.21□□□□□ -1.1
RPD3YNL330C PYK2P52489 506 aaKnown RBP8.21□□□□□ -1.1
RPD3YNL330C YDR514CQ04408 483 aa8.21□□□□□ -1.1
RPD3YNL330C EMI2Q04409 500 aaKnown RBP8.21□□□□□ -1.1
RPD3YNL330C TEN1Q07921 160 aa8.21□□□□□ -1.1
RPD3YNL330C YTM1Q12024 460 aaPredicted RBP8.21□□□□□ -1.1
RPD3YNL330C RPC40P07703 335 aaKnown RBP8.2□□□□□ -1.1
RPD3YNL330C REV1P12689 985 aa8.2□□□□□ -1.1
RPD3YNL330C PET9P18239 318 aaKnown RBP8.2□□□□□ -1.1
RPD3YNL330C PEX1P24004 1043 aa8.2□□□□□ -1.1
RPD3YNL330C ARE1P25628 610 aa8.2□□□□□ -1.1
RPD3YNL330C RFA2P26754 273 aaKnown RBP8.2□□□□□ -1.1
RPD3YNL330C OAC1P32332 324 aa8.2□□□□□ -1.1
RPD3YNL330C SSO1P32867 290 aa8.2□□□□□ -1.1
RPD3YNL330C DHR2P36009 735 aaPredicted RBP8.2□□□□□ -1.1
RPD3YNL330C ZTA1P38230 334 aaKnown RBP8.2□□□□□ -1.1
RPD3YNL330C STP2P38704 541 aa8.2□□□□□ -1.1
RPD3YNL330C SBE22P38814 852 aa8.2□□□□□ -1.1
RPD3YNL330C YPT35P38815 214 aaKnown RBP8.2□□□□□ -1.1
RPD3YNL330C CTF8P38877 133 aa8.2□□□□□ -1.1
RPD3YNL330C RCY1P39531 840 aa8.2□□□□□ -1.1
RPD3YNL330C BOL3P39724 118 aa8.2□□□□□ -1.1
RPD3YNL330C MIT1P40002 666 aa8.2□□□□□ -1.1
RPD3YNL330C GIM4P40005 111 aaKnown RBP8.2□□□□□ -1.1
RPD3YNL330C YJR098CP47139 656 aa8.2□□□□□ -1.1
RPD3YNL330C GCV1P48015 400 aa8.2□□□□□ -1.1
RPD3YNL330C PAC10P48363 199 aa8.2□□□□□ -1.1
RPD3YNL330C BIO3P50277 480 aa8.2□□□□□ -1.1
RPD3YNL330C TGL2P54857 326 aa8.2□□□□□ -1.1
RPD3YNL330C YSA1Q01976 231 aa8.2□□□□□ -1.1
RPD3YNL330C HEH2Q03281 663 aa8.2□□□□□ -1.1
RPD3YNL330C PFA5Q03289 374 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms