RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF120	YNL278W	PET122	P10355	254 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	KGD2	P19262	463 aa	Predicted RBP	2.66	□□□□□ -1.98
CAF120	YNL278W	YCL002C	P25565	263 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	ATP11	P32453	318 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	AST1	P35183	429 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	IST2	P38250	946 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	HSL7	P38274	827 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	MBA1	P38300	278 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	RCK1	P38622	512 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	MUP3	P38734	546 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	GGC1	P38988	300 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	FET3	P38993	636 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	EMP65	P40085	556 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	COA1	P40452	197 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	YFL054C	P43549	646 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	ENT5	Q03769	411 aa	Known RBP	2.66	□□□□□ -1.98
CAF120	YNL278W	ARX1	Q03862	593 aa	Known RBP	2.66	□□□□□ -1.98
CAF120	YNL278W	DTD1	Q07648	150 aa	Known RBP	2.66	□□□□□ -1.98
CAF120	YNL278W	YLR012C	Q07927	99 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	PUS9	Q12069	462 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	GLO4	Q12320	285 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	HTZ1	Q12692	134 aa	Known RBP	2.66	□□□□□ -1.98
CAF120	YNL278W	Q0142	Q9ZZW4	58 aa		2.66	□□□□□ -1.98
CAF120	YNL278W	CDC33	P07260	213 aa	Known RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	CHS1	P08004	1131 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	SSA3	P09435	649 aa	Known RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	GAL3	P13045	520 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	ARO3	P14843	370 aa	Known RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	CBS2	P14905	389 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	GIT1	P25346	518 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	GID7	P25569	745 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	CDC20	P26309	610 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	HRR25	P29295	494 aa	Known RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	UTR4	P32626	227 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	BCS1	P32839	456 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	YKR051W	P36142	418 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	MRPL17	P36528	281 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	MNN2	P38069	597 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	THI2	P38141	450 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	OSH7	P38755	437 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	WSS1	P38838	269 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	UTP25	P40498	721 aa	Known RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	IRC24	P40580	263 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	LSM1	P47017	172 aa	Known RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	RAI1	P53063	387 aa	Known RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	CSL4	P53859	292 aa	Predicted RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	YSA1	Q01976	231 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	RSM10	Q03201	203 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	ATC1	Q04005	294 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	LEU9	Q12166	604 aa	Known RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	MRPL23	Q12487	163 aa	Predicted RBP	2.65	□□□□□ -1.98
CAF120	YNL278W	SFG1	Q12507	346 aa		2.65	□□□□□ -1.98
CAF120	YNL278W	PHO5	P00635	467 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	SIR3	P06701	978 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	PHO3	P24031	467 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	MVD1	P32377	396 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	THI80	P35202	319 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	STB6	P36085	766 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	ETR1	P38071	380 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	YHI9	P38765	294 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	AIM46	P38885	310 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	PTI1	P39927	425 aa	Predicted RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	YER184C	P39961	794 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	FCY21	P40039	528 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	DDI1	P40087	428 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	SYG1	P40528	902 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	ALK1	P43633	760 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	SSU72	P53538	206 aa	Predicted RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	YNR065C	P53751	1116 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	PRM1	P53835	661 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	DFG5	Q05031	458 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	CRT10	Q08226	957 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	YOL075C	Q08234	1294 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	NMD4	Q12129	218 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
CAF120	YNL278W	CTF3	Q12748	733 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	YPR089W	O13585	888 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	ARG4	P04076	463 aa	Predicted RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	RPL11A	P0C0W9	174 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	CDC24	P11433	854 aa	Predicted RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	ATR1	P13090	542 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	MTF1	P14908	341 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	PRP4	P20053	465 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	HSP30	P25619	332 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	BUD23	P25627	275 aa	Predicted RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	MAE1	P36013	669 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	EGD2	P38879	174 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	MNN9	P39107	395 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	SCS2	P40075	244 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	LRO1	P40345	661 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	ICE2	P40499	491 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	SLS1	P42900	643 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	LSB3	P43603	459 aa	Known RBP	2.65	□□□□□ -1.99
CAF120	YNL278W	IBA57	P47158	497 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	BIO3	P50277	480 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	COQ6	P53318	479 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	MPS1	P54199	764 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	MRPL13	Q02204	264 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	TAF12	Q03761	539 aa		2.65	□□□□□ -1.99
CAF120	YNL278W	LRS4	Q04087	347 aa	Known RBP	2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms