RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W YNL320WP42840 284 aa6.79□□□□□ -1.32
PRE5YMR314W UPF3P48412 387 aaKnown RBP6.79□□□□□ -1.32
PRE5YMR314W YML131WQ03102 365 aa6.79□□□□□ -1.32
PRE5YMR314W YMR155WQ03795 547 aa6.79□□□□□ -1.32
PRE5YMR314W SEC10Q06245 871 aa6.79□□□□□ -1.32
PRE5YMR314W YOL019WQ08157 551 aa6.79□□□□□ -1.32
PRE5YMR314W YDL211CQ12121 372 aa6.79□□□□□ -1.32
PRE5YMR314W WSC3Q12215 556 aa6.79□□□□□ -1.32
PRE5YMR314W SLP1Q12232 587 aa6.79□□□□□ -1.32
PRE5YMR314W SKS1Q12505 502 aa6.79□□□□□ -1.32
PRE5YMR314W CBP6P07253 162 aaPredicted RBP6.78□□□□□ -1.32
PRE5YMR314W MET2P08465 486 aa6.78□□□□□ -1.32
PRE5YMR314W YHR214C-DP0CX93 97 aa6.78□□□□□ -1.32
PRE5YMR314W ART10P18634 518 aaKnown RBP6.78□□□□□ -1.32
PRE5YMR314W SPO23P33757 523 aa6.78□□□□□ -1.32
PRE5YMR314W SET3P36124 751 aa6.78□□□□□ -1.32
PRE5YMR314W DTR1P38125 572 aa6.78□□□□□ -1.32
PRE5YMR314W BZZ1P38822 633 aa6.78□□□□□ -1.32
PRE5YMR314W REV7P38927 245 aa6.78□□□□□ -1.32
PRE5YMR314W YHB1P39676 399 aaKnown RBP6.78□□□□□ -1.32
PRE5YMR314W PZF1P39933 429 aa6.78□□□□□ -1.32
PRE5YMR314W GAT2P40209 560 aa6.78□□□□□ -1.32
PRE5YMR314W NDC80P40460 691 aa6.78□□□□□ -1.32
PRE5YMR314W KEL2P50090 882 aa6.78□□□□□ -1.32
PRE5YMR314W AIF1P52923 378 aa6.78□□□□□ -1.32
PRE5YMR314W TPC1P53257 314 aa6.78□□□□□ -1.32
PRE5YMR314W CUZ1P53899 274 aa6.78□□□□□ -1.32
PRE5YMR314W TIM10P87108 93 aa6.78□□□□□ -1.32
PRE5YMR314W RRG7Q08774 242 aaPredicted RBP6.78□□□□□ -1.32
PRE5YMR314W GPB1Q08886 897 aa6.78□□□□□ -1.32
PRE5YMR314W PFK27Q12471 397 aaPredicted RBP6.78□□□□□ -1.32
PRE5YMR314W CAR2P07991 424 aaKnown RBP6.77□□□□□ -1.33
PRE5YMR314W PDA1P16387 420 aaKnown RBP6.77□□□□□ -1.33
PRE5YMR314W YEF1P32622 495 aa6.77□□□□□ -1.33
PRE5YMR314W PTH2P34222 208 aa6.77□□□□□ -1.33
PRE5YMR314W BYE1P36106 594 aa6.77□□□□□ -1.33
PRE5YMR314W APD1P38281 316 aa6.77□□□□□ -1.33
PRE5YMR314W MGE1P38523 228 aa6.77□□□□□ -1.33
PRE5YMR314W YHL037CP38733 133 aa6.77□□□□□ -1.33
PRE5YMR314W PTH1P38876 190 aaKnown RBP6.77□□□□□ -1.33
PRE5YMR314W UTP9P38882 575 aaKnown RBP6.77□□□□□ -1.33
PRE5YMR314W PEP8P40335 379 aa6.77□□□□□ -1.33
PRE5YMR314W AIM22P47051 409 aa6.77□□□□□ -1.33
PRE5YMR314W RNH70P53331 553 aa6.77□□□□□ -1.33
PRE5YMR314W SHR3Q02774 210 aa6.77□□□□□ -1.33
PRE5YMR314W MET31Q03081 177 aa6.77□□□□□ -1.33
PRE5YMR314W USA1Q03714 838 aa6.77□□□□□ -1.33
PRE5YMR314W PSF1Q12488 208 aa6.77□□□□□ -1.33
PRE5YMR314W ARF1P11076 181 aaKnown RBP6.76□□□□□ -1.33
PRE5YMR314W NMT1P14743 455 aa6.76□□□□□ -1.33
PRE5YMR314W PET123P17558 318 aa6.76□□□□□ -1.33
PRE5YMR314W AAC3P18238 307 aa6.76□□□□□ -1.33
PRE5YMR314W RPB5P20434 215 aa6.76□□□□□ -1.33
PRE5YMR314W MEF1P25039 761 aa6.76□□□□□ -1.33
PRE5YMR314W OAF1P39720 1047 aaPredicted RBP6.76□□□□□ -1.33
PRE5YMR314W PRY1P47032 299 aa6.76□□□□□ -1.33
PRE5YMR314W MAD3P47074 515 aa6.76□□□□□ -1.33
PRE5YMR314W RHO4Q00246 291 aa6.76□□□□□ -1.33
PRE5YMR314W SDC1Q03323 175 aa6.76□□□□□ -1.33
PRE5YMR314W ERB1Q04660 807 aaKnown RBP6.76□□□□□ -1.33
PRE5YMR314W FDH1Q08911 376 aa6.76□□□□□ -1.33
PRE5YMR314W YOR223WQ12015 292 aa6.76□□□□□ -1.33
PRE5YMR314W NTO1Q12311 748 aa6.76□□□□□ -1.33
PRE5YMR314W MRPL25P23369 157 aa6.75□□□□□ -1.33
PRE5YMR314W PBN1P25580 416 aa6.75□□□□□ -1.33
PRE5YMR314W SYP1P25623 870 aaKnown RBP6.75□□□□□ -1.33
PRE5YMR314W HSP150P32478 413 aa6.75□□□□□ -1.33
PRE5YMR314W ATG7P38862 630 aa6.75□□□□□ -1.33
PRE5YMR314W YJL206CP39529 758 aa6.75□□□□□ -1.33
PRE5YMR314W AST2P39945 430 aaKnown RBP6.75□□□□□ -1.33
PRE5YMR314W MET18P40469 1032 aa6.75□□□□□ -1.33
PRE5YMR314W REE1P40893 198 aa6.75□□□□□ -1.33
PRE5YMR314W YGR066CP53242 292 aa6.75□□□□□ -1.33
PRE5YMR314W SOK2P53438 785 aaPredicted RBP6.75□□□□□ -1.33
PRE5YMR314W LSC1P53598 329 aaKnown RBP6.75□□□□□ -1.33
PRE5YMR314W IST1P53843 298 aaPredicted RBP6.75□□□□□ -1.33
PRE5YMR314W YPL071CQ02864 156 aa6.75□□□□□ -1.33
PRE5YMR314W RRB1Q04225 511 aaKnown RBP6.75□□□□□ -1.33
PRE5YMR314W PAL1Q05518 499 aaKnown RBP6.75□□□□□ -1.33
PRE5YMR314W MRL1Q06815 381 aa6.75□□□□□ -1.33
PRE5YMR314W FLP1P03870 423 aa6.74□□□□□ -1.33
PRE5YMR314W HEM4P06174 275 aa6.74□□□□□ -1.33
PRE5YMR314W GPH1P06738 902 aaKnown RBP6.74□□□□□ -1.33
PRE5YMR314W GAL3P13045 520 aa6.74□□□□□ -1.33
PRE5YMR314W DAT1P13483 248 aaKnown RBP6.74□□□□□ -1.33
PRE5YMR314W YAP1P19880 650 aaKnown RBP6.74□□□□□ -1.33
PRE5YMR314W MCK1P21965 375 aaKnown RBP6.74□□□□□ -1.33
PRE5YMR314W OCA4P25366 362 aa6.74□□□□□ -1.33
PRE5YMR314W YKR073CP36153 106 aa6.74□□□□□ -1.33
PRE5YMR314W PRS3P38689 320 aaKnown RBP6.74□□□□□ -1.33
PRE5YMR314W DLD3P39976 496 aaKnown RBP6.74□□□□□ -1.33
PRE5YMR314W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
PRE5YMR314W GTR2P53290 341 aa6.74□□□□□ -1.33
PRE5YMR314W YNR040WP53736 256 aa6.74□□□□□ -1.33
PRE5YMR314W EAF7P53911 425 aaKnown RBP6.74□□□□□ -1.33
PRE5YMR314W RNY1Q02933 434 aaKnown RBP6.74□□□□□ -1.33
PRE5YMR314W API2Q04413 109 aa6.74□□□□□ -1.33
PRE5YMR314W PML1Q07930 204 aaPredicted RBP6.74□□□□□ -1.33
PRE5YMR314W MCM16Q12262 181 aa6.74□□□□□ -1.33
PRE5YMR314W FOL3Q12676 427 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms