RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YPL068CQ02749 293 aa2.28□□□□□ -2.05
VPS13YLL040C CSN9Q03981 162 aa2.28□□□□□ -2.05
VPS13YLL040C TPO3Q06451 622 aa2.28□□□□□ -2.05
VPS13YLL040C GRE1Q08969 168 aa2.28□□□□□ -2.05
VPS13YLL040C YLR108CQ12259 485 aa2.28□□□□□ -2.05
VPS13YLL040C GLO4Q12320 285 aa2.28□□□□□ -2.05
VPS13YLL040C SPS19P32573 292 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C YKL071WP36086 256 aa2.27□□□□□ -2.05
VPS13YLL040C SOL2P37262 315 aa2.27□□□□□ -2.05
VPS13YLL040C BNA4P38169 460 aa2.27□□□□□ -2.05
VPS13YLL040C YBL029WP38201 376 aa2.27□□□□□ -2.05
VPS13YLL040C SPO74P45819 413 aa2.27□□□□□ -2.05
VPS13YLL040C YNL143CP53908 130 aa2.27□□□□□ -2.05
VPS13YLL040C YLR455WQ06188 304 aa2.27□□□□□ -2.05
VPS13YLL040C DIN7Q12086 430 aa2.27□□□□□ -2.05
VPS13YLL040C YRM1Q12340 786 aa2.27□□□□□ -2.05
VPS13YLL040C RPN6Q12377 434 aa2.27□□□□□ -2.05
VPS13YLL040C MCM1P11746 286 aa2.27□□□□□ -2.05
VPS13YLL040C KGD2P19262 463 aaPredicted RBP2.27□□□□□ -2.05
VPS13YLL040C FPR1P20081 114 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C PRI2P20457 528 aa2.27□□□□□ -2.05
VPS13YLL040C IDH1P28834 360 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VPS13YLL040C NTG1P31378 399 aa2.27□□□□□ -2.05
VPS13YLL040C UIP5P36137 443 aa2.27□□□□□ -2.05
VPS13YLL040C FLC3P53121 802 aa2.27□□□□□ -2.05
VPS13YLL040C GAS2Q06135 555 aa2.27□□□□□ -2.05
VPS13YLL040C YPR015CQ12531 247 aa2.27□□□□□ -2.05
VPS13YLL040C INH1P01097 85 aa2.27□□□□□ -2.05
VPS13YLL040C ENA1P13587 1091 aa2.27□□□□□ -2.05
VPS13YLL040C HXT2P23585 541 aa2.27□□□□□ -2.05
VPS13YLL040C PGS1P25578 521 aa2.27□□□□□ -2.05
VPS13YLL040C NAB2P32505 525 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VPS13YLL040C BMT2P38278 337 aa2.27□□□□□ -2.05
VPS13YLL040C SHG1P38337 142 aa2.27□□□□□ -2.05
VPS13YLL040C LNP1P38878 278 aa2.27□□□□□ -2.05
VPS13YLL040C RRG9P40156 214 aa2.27□□□□□ -2.05
VPS13YLL040C MNT3P40549 630 aa2.27□□□□□ -2.05
VPS13YLL040C YIR007WP40566 764 aa2.27□□□□□ -2.05
VPS13YLL040C CAF120P53836 1060 aa2.27□□□□□ -2.05
VPS13YLL040C ENA2Q01896 1091 aa2.27□□□□□ -2.05
VPS13YLL040C SEG1Q04279 960 aa2.27□□□□□ -2.05
VPS13YLL040C BUR2Q05949 395 aa2.27□□□□□ -2.05
VPS13YLL040C ENA5Q12691 1091 aa2.27□□□□□ -2.05
VPS13YLL040C REP2P03872 296 aa2.27□□□□□ -2.05
VPS13YLL040C PDE2P06776 526 aa2.27□□□□□ -2.05
VPS13YLL040C STE7P06784 515 aa2.27□□□□□ -2.05
VPS13YLL040C DBF2P22204 572 aa2.27□□□□□ -2.05
VPS13YLL040C NRP1P32770 719 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VPS13YLL040C TFB1P32776 642 aa2.27□□□□□ -2.05
VPS13YLL040C SDS22P36047 338 aa2.27□□□□□ -2.05
VPS13YLL040C CWC23P52868 283 aaPredicted RBP2.27□□□□□ -2.05
VPS13YLL040C HER2Q03557 464 aa2.27□□□□□ -2.05
VPS13YLL040C ROY1Q04847 553 aa2.27□□□□□ -2.05
VPS13YLL040C RAX1Q08760 435 aa2.27□□□□□ -2.05
VPS13YLL040C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VPS13YLL040C PKH2Q12236 1081 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C SIR1P21691 654 aa2.27□□□□□ -2.05
VPS13YLL040C ECM25P32525 599 aa2.27□□□□□ -2.05
VPS13YLL040C PPG1P32838 368 aa2.27□□□□□ -2.05
VPS13YLL040C MRPL40P36534 297 aa2.27□□□□□ -2.05
VPS13YLL040C IML3P38265 245 aa2.27□□□□□ -2.05
VPS13YLL040C LRP1P38801 184 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C TRR2P38816 342 aa2.27□□□□□ -2.05
VPS13YLL040C ACO2P39533 789 aa2.27□□□□□ -2.05
VPS13YLL040C YJR154WP47181 346 aa2.27□□□□□ -2.05
VPS13YLL040C YMR160WQ03823 816 aa2.27□□□□□ -2.05
VPS13YLL040C IRC10Q08118 586 aa2.27□□□□□ -2.05
VPS13YLL040C RAD59Q12223 238 aa2.27□□□□□ -2.05
VPS13YLL040C TSC13Q99190 310 aa2.27□□□□□ -2.05
VPS13YLL040C CDC7P06243 507 aa2.27□□□□□ -2.05
VPS13YLL040C ADE5,7P07244 802 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C CNB1P25296 175 aa2.27□□□□□ -2.05
VPS13YLL040C PEX3P28795 441 aa2.27□□□□□ -2.05
VPS13YLL040C SFC1P33303 322 aa2.27□□□□□ -2.05
VPS13YLL040C AVT5P38176 459 aa2.27□□□□□ -2.05
VPS13YLL040C LYS12P40495 371 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C PFS2P42841 465 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C CAK1P43568 368 aaPredicted RBP2.27□□□□□ -2.05
VPS13YLL040C TUB4P53378 473 aa2.27□□□□□ -2.05
VPS13YLL040C ELP3Q02908 557 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C RKM2Q03942 479 aa2.27□□□□□ -2.05
VPS13YLL040C DCR2Q05924 578 aa2.27□□□□□ -2.05
VPS13YLL040C PEX30Q06169 523 aa2.27□□□□□ -2.05
VPS13YLL040C SHS1Q07657 551 aa2.27□□□□□ -2.05
VPS13YLL040C YOL159CQ08300 171 aa2.27□□□□□ -2.05
VPS13YLL040C GUP2Q08929 609 aa2.27□□□□□ -2.05
VPS13YLL040C COX3P00420 269 aa2.27□□□□□ -2.05
VPS13YLL040C SUC2P00724 532 aa2.27□□□□□ -2.05
VPS13YLL040C VAC17P25591 423 aa2.27□□□□□ -2.05
VPS13YLL040C MCM10P32354 571 aa2.27□□□□□ -2.05
VPS13YLL040C NUP2P32499 720 aa2.27□□□□□ -2.05
VPS13YLL040C EMP24P32803 203 aaKnown RBP2.27□□□□□ -2.05
VPS13YLL040C MSN4P33749 630 aa2.27□□□□□ -2.05
VPS13YLL040C EMC3P36039 253 aa2.27□□□□□ -2.05
VPS13YLL040C YHK8P38776 514 aa2.27□□□□□ -2.05
VPS13YLL040C PMT6P42934 759 aa2.27□□□□□ -2.05
VPS13YLL040C YFL052WP43551 465 aa2.27□□□□□ -2.05
VPS13YLL040C RET2P43621 546 aa2.27□□□□□ -2.05
VPS13YLL040C RSB1Q08417 382 aa2.27□□□□□ -2.05
VPS13YLL040C SAM4Q08985 325 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms