RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C ROY1Q04847 553 aa5.27□□□□□ -1.57
VPS1YKR001C ATG23Q06671 453 aa5.27□□□□□ -1.57
VPS1YKR001C ZEO1Q08245 113 aa5.27□□□□□ -1.57
VPS1YKR001C IES4Q08561 116 aa5.27□□□□□ -1.57
VPS1YKR001C OSW1Q08692 278 aa5.27□□□□□ -1.57
VPS1YKR001C SAM3Q08986 587 aa5.27□□□□□ -1.57
VPS1YKR001C SPE3Q12074 293 aaKnown RBP5.27□□□□□ -1.57
VPS1YKR001C APC9Q12107 265 aa5.27□□□□□ -1.57
VPS1YKR001C SUL2Q12325 893 aa5.27□□□□□ -1.57
VPS1YKR001C MSB2P32334 1306 aa5.27□□□□□ -1.57
VPS1YKR001C SPS4P09937 338 aa5.26□□□□□ -1.57
VPS1YKR001C ZWF1P11412 505 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C PEX34P25584 144 aa5.26□□□□□ -1.57
VPS1YKR001C PDC6P26263 563 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C SIP2P34164 415 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C KKQ8P36004 724 aa5.26□□□□□ -1.57
VPS1YKR001C SNU114P36048 1008 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C STB6P36085 766 aa5.26□□□□□ -1.57
VPS1YKR001C TAE1P38340 232 aa5.26□□□□□ -1.57
VPS1YKR001C LYS9P38999 446 aa5.26□□□□□ -1.57
VPS1YKR001C YJL206CP39529 758 aa5.26□□□□□ -1.57
VPS1YKR001C ALK1P43633 760 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C FAA4P47912 694 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C PRP38Q00723 242 aaPredicted RBP5.26□□□□□ -1.57
VPS1YKR001C YSA1Q01976 231 aa5.26□□□□□ -1.57
VPS1YKR001C MRX10Q05648 414 aa5.26□□□□□ -1.57
VPS1YKR001C NEJ1Q06148 342 aa5.26□□□□□ -1.57
VPS1YKR001C TDA5Q06417 326 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C CDD1Q06549 142 aa5.26□□□□□ -1.57
VPS1YKR001C CSM4Q08955 156 aa5.26□□□□□ -1.57
VPS1YKR001C DCS2Q12123 353 aa5.26□□□□□ -1.57
VPS1YKR001C NSL1Q12143 216 aa5.26□□□□□ -1.57
VPS1YKR001C SFM1Q12314 213 aa5.26□□□□□ -1.57
VPS1YKR001C SEM1O94742 89 aa5.26□□□□□ -1.57
VPS1YKR001C PFK1P16861 987 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C PHO81P17442 1178 aa5.26□□□□□ -1.57
VPS1YKR001C SNF6P18888 332 aa5.26□□□□□ -1.57
VPS1YKR001C SIR1P21691 654 aa5.26□□□□□ -1.57
VPS1YKR001C PDE1P22434 369 aa5.26□□□□□ -1.57
VPS1YKR001C PRE7P23724 241 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C ADE1P27616 306 aa5.26□□□□□ -1.57
VPS1YKR001C MLS1P30952 554 aa5.26□□□□□ -1.57
VPS1YKR001C ECM25P32525 599 aa5.26□□□□□ -1.57
VPS1YKR001C LHP1P33399 275 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C RPS1AP33442 255 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C BET3P36149 193 aa5.26□□□□□ -1.57
VPS1YKR001C VID24P38263 362 aa5.26□□□□□ -1.57
VPS1YKR001C RBG1P39729 369 aa5.26□□□□□ -1.57
VPS1YKR001C YER121WP40076 114 aa5.26□□□□□ -1.57
VPS1YKR001C EFM4P40516 257 aa5.26□□□□□ -1.57
VPS1YKR001C MRPS18P42847 217 aa5.26□□□□□ -1.57
VPS1YKR001C YGR201CP42936 225 aa5.26□□□□□ -1.57
VPS1YKR001C PET130P47065 347 aa5.26□□□□□ -1.57
VPS1YKR001C ARE2P53629 642 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C HXT17P53631 564 aa5.26□□□□□ -1.57
VPS1YKR001C CUS2P53830 285 aaPredicted RBP5.26□□□□□ -1.57
VPS1YKR001C ALG11P53954 548 aaKnown RBP5.26□□□□□ -1.57
VPS1YKR001C SDH1Q00711 640 aa5.26□□□□□ -1.57
VPS1YKR001C YDR541CQ03049 344 aa5.26□□□□□ -1.57
VPS1YKR001C YHM2Q04013 314 aa5.26□□□□□ -1.57
VPS1YKR001C YDR444WQ04093 687 aa5.26□□□□□ -1.57
VPS1YKR001C YDR387CQ04162 555 aa5.26□□□□□ -1.57
VPS1YKR001C MRPL1Q04599 285 aa5.26□□□□□ -1.57
VPS1YKR001C YLR297WQ05899 129 aa5.26□□□□□ -1.57
VPS1YKR001C PEX15Q08215 383 aa5.26□□□□□ -1.57
VPS1YKR001C YOL107WQ12239 342 aa5.26□□□□□ -1.57
VPS1YKR001C ZPS1Q12512 249 aa5.26□□□□□ -1.57
VPS1YKR001C YBR298C-AQ8TGK4 73 aa5.26□□□□□ -1.57
VPS1YKR001C VCX1Q99385 411 aa5.26□□□□□ -1.57
VPS1YKR001C HTB1P02293 131 aaKnown RBP5.25□□□□□ -1.57
VPS1YKR001C HTB2P02294 131 aa5.25□□□□□ -1.57
VPS1YKR001C ILV2P07342 687 aaKnown RBP5.25□□□□□ -1.57
VPS1YKR001C MRP1P10662 321 aaKnown RBP5.25□□□□□ -1.57
VPS1YKR001C DCC1P25559 380 aa5.25□□□□□ -1.57
VPS1YKR001C ARE1P25628 610 aa5.25□□□□□ -1.57
VPS1YKR001C CYS3P31373 394 aaKnown RBP5.25□□□□□ -1.57
VPS1YKR001C TSA1P34760 196 aaKnown RBP5.25□□□□□ -1.57
VPS1YKR001C DAD2P36162 133 aa5.25□□□□□ -1.57
VPS1YKR001C YHR045WP38775 560 aa5.25□□□□□ -1.57
VPS1YKR001C GDH3P39708 457 aa5.25□□□□□ -1.57
VPS1YKR001C ERV46P39727 415 aa5.25□□□□□ -1.57
VPS1YKR001C THI6P41835 540 aa5.25□□□□□ -1.57
VPS1YKR001C ULI1P43604 169 aa5.25□□□□□ -1.57
VPS1YKR001C FMP48P53233 369 aa5.25□□□□□ -1.57
VPS1YKR001C SLG1P54867 378 aa5.25□□□□□ -1.57
VPS1YKR001C YAT1P80235 687 aa5.25□□□□□ -1.57
VPS1YKR001C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
VPS1YKR001C CDC123Q05791 360 aa5.25□□□□□ -1.57
VPS1YKR001C BUR2Q05949 395 aa5.25□□□□□ -1.57
VPS1YKR001C FMP25Q08023 583 aa5.25□□□□□ -1.57
VPS1YKR001C MCH5Q08777 521 aa5.25□□□□□ -1.57
VPS1YKR001C FMP16Q12497 93 aa5.25□□□□□ -1.57
VPS1YKR001C STE2D6VTK4 431 aa5.24□□□□□ -1.57
VPS1YKR001C TPK1P06244 397 aa5.24□□□□□ -1.57
VPS1YKR001C RAD10P06838 210 aa5.24□□□□□ -1.57
VPS1YKR001C MIR1P23641 311 aaKnown RBP5.24□□□□□ -1.57
VPS1YKR001C YIM1P28625 365 aa5.24□□□□□ -1.57
VPS1YKR001C PRE4P30657 266 aa5.24□□□□□ -1.57
VPS1YKR001C CCR4P31384 837 aaKnown RBP5.24□□□□□ -1.57
VPS1YKR001C PDR3P33200 976 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms