RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C RPL35AP0CX84 120 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C RPL35BP0CX85 120 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C PHO91P27514 894 aa3.8□□□□□ -1.8
SPT23YKL020C PGM1P33401 570 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C RER2P35196 286 aa3.8□□□□□ -1.8
SPT23YKL020C ICS2P38284 255 aa3.8□□□□□ -1.8
SPT23YKL020C YHK8P38776 514 aa3.8□□□□□ -1.8
SPT23YKL020C RRP4P38792 359 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C BZZ1P38822 633 aa3.8□□□□□ -1.8
SPT23YKL020C YEL025CP39991 1188 aa3.8□□□□□ -1.8
SPT23YKL020C HXT9P40885 567 aa3.8□□□□□ -1.8
SPT23YKL020C IRC7P43623 340 aa3.8□□□□□ -1.8
SPT23YKL020C SIP4P46954 829 aa3.8□□□□□ -1.8
SPT23YKL020C PYK2P52489 506 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C PMT5P52867 743 aa3.8□□□□□ -1.8
SPT23YKL020C ERV14P53173 138 aa3.8□□□□□ -1.8
SPT23YKL020C GET1P53192 235 aa3.8□□□□□ -1.8
SPT23YKL020C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SPT23YKL020C YET2Q04210 160 aa3.8□□□□□ -1.8
SPT23YKL020C CRF1Q04930 467 aa3.8□□□□□ -1.8
SPT23YKL020C OPT2Q06593 877 aa3.8□□□□□ -1.8
SPT23YKL020C OXR1Q08952 273 aa3.8□□□□□ -1.8
SPT23YKL020C CSM4Q08955 156 aa3.8□□□□□ -1.8
SPT23YKL020C INP53Q12271 1107 aa3.8□□□□□ -1.8
SPT23YKL020C SUL2Q12325 893 aa3.8□□□□□ -1.8
SPT23YKL020C PDH1Q12428 516 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C MED11Q99278 115 aa3.8□□□□□ -1.8
SPT23YKL020C UGA1P17649 471 aa3.8□□□□□ -1.8
SPT23YKL020C NPR1P22211 790 aa3.8□□□□□ -1.8
SPT23YKL020C YCK1P23291 538 aa3.8□□□□□ -1.8
SPT23YKL020C COQ2P32378 372 aa3.8□□□□□ -1.8
SPT23YKL020C UGP1P32861 499 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C LHP1P33399 275 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C ALY1P36117 915 aa3.8□□□□□ -1.8
SPT23YKL020C YBR071WP38243 211 aa3.8□□□□□ -1.8
SPT23YKL020C ECM8P38246 354 aa3.8□□□□□ -1.8
SPT23YKL020C AIM3P38266 947 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C POP4P38336 279 aa3.8□□□□□ -1.8
SPT23YKL020C BIT2P38346 545 aa3.8□□□□□ -1.8
SPT23YKL020C GIP2P40036 548 aa3.8□□□□□ -1.8
SPT23YKL020C SLS1P42900 643 aa3.8□□□□□ -1.8
SPT23YKL020C IRC8P47046 822 aa3.8□□□□□ -1.8
SPT23YKL020C EFM3P47163 339 aa3.8□□□□□ -1.8
SPT23YKL020C DUO1P53168 247 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C HHO1P53551 258 aa3.8□□□□□ -1.8
SPT23YKL020C ARE2P53629 642 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C CTF19Q02732 369 aa3.8□□□□□ -1.8
SPT23YKL020C TRS31Q03337 283 aa3.8□□□□□ -1.8
SPT23YKL020C RSF1Q05043 376 aa3.8□□□□□ -1.8
SPT23YKL020C YLR456WQ06199 204 aa3.8□□□□□ -1.8
SPT23YKL020C CDD1Q06549 142 aa3.8□□□□□ -1.8
SPT23YKL020C GRE1Q08969 168 aa3.8□□□□□ -1.8
SPT23YKL020C SNF8Q12483 233 aa3.8□□□□□ -1.8
SPT23YKL020C CDC28P00546 298 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C PHO4P07270 312 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C CBS1P14066 229 aa3.79□□□□□ -1.8
SPT23YKL020C MTF1P14908 341 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C GRX1P25373 110 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C PRO3P32263 286 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C HEM12P32347 362 aaPredicted RBP3.79□□□□□ -1.8
SPT23YKL020C SPR1P32603 445 aa3.79□□□□□ -1.8
SPT23YKL020C SNU114P36048 1008 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C YBR056WP38081 501 aa3.79□□□□□ -1.8
SPT23YKL020C PRE3P38624 215 aa3.79□□□□□ -1.8
SPT23YKL020C TIR3P40552 269 aa3.79□□□□□ -1.8
SPT23YKL020C MET28P40573 187 aa3.79□□□□□ -1.8
SPT23YKL020C THI6P41835 540 aa3.79□□□□□ -1.8
SPT23YKL020C YJL043WP47053 257 aa3.79□□□□□ -1.8
SPT23YKL020C PUS4P48567 403 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C YGL159WP53110 370 aa3.79□□□□□ -1.8
SPT23YKL020C ATC1Q04005 294 aa3.79□□□□□ -1.8
SPT23YKL020C MRX10Q05648 414 aa3.79□□□□□ -1.8
SPT23YKL020C CDC123Q05791 360 aa3.79□□□□□ -1.8
SPT23YKL020C NEJ1Q06148 342 aa3.79□□□□□ -1.8
SPT23YKL020C YLR413WQ06689 675 aa3.79□□□□□ -1.8
SPT23YKL020C PML1Q07930 204 aaPredicted RBP3.79□□□□□ -1.8
SPT23YKL020C RRP42Q12277 265 aaPredicted RBP3.79□□□□□ -1.8
SPT23YKL020C YDR262WQ12331 272 aa3.79□□□□□ -1.8
SPT23YKL020C WIP1Q2V2P8 89 aa3.79□□□□□ -1.8
SPT23YKL020C NBL1Q3E7Y6 73 aa3.79□□□□□ -1.8
SPT23YKL020C BAR1P12630 587 aa3.79□□□□□ -1.8
SPT23YKL020C FRS1P15624 595 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C RFA1P22336 621 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C RER1P25560 188 aa3.79□□□□□ -1.8
SPT23YKL020C CDC50P25656 391 aa3.79□□□□□ -1.8
SPT23YKL020C URA7P28274 579 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C PRE4P30657 266 aa3.79□□□□□ -1.8
SPT23YKL020C NGG1P32494 702 aa3.79□□□□□ -1.8
SPT23YKL020C KKQ8P36004 724 aa3.79□□□□□ -1.8
SPT23YKL020C CTP1P38152 299 aa3.79□□□□□ -1.8
SPT23YKL020C YHL041WP38730 149 aa3.79□□□□□ -1.8
SPT23YKL020C DUN1P39009 513 aa3.79□□□□□ -1.8
SPT23YKL020C YEL020CP39994 560 aa3.79□□□□□ -1.8
SPT23YKL020C YER085CP40058 173 aa3.79□□□□□ -1.8
SPT23YKL020C LSM5P40089 93 aaKnown RBP3.79□□□□□ -1.8
SPT23YKL020C HXT8P40886 569 aa3.79□□□□□ -1.8
SPT23YKL020C PRM10P42946 383 aa3.79□□□□□ -1.8
SPT23YKL020C GSM1P42950 618 aa3.79□□□□□ -1.8
SPT23YKL020C LSB6P42951 607 aa3.79□□□□□ -1.8
SPT23YKL020C CPR7P47103 393 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms