RNA–Protein interactions for RNA: YFR043C

IRC6, Transcript of Putative protein of unknown function, yeast

Gene IRC6, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC6	YFR043C	YDR341C	Q05506	607 aa	Known RBP	4.12	□□□□□ -1.75
IRC6	YFR043C	SNX3	Q08826	162 aa	Known RBP	4.12	□□□□□ -1.75
IRC6	YFR043C	SRL2	Q12020	392 aa		4.12	□□□□□ -1.75
IRC6	YFR043C	HHF1	P02309	103 aa	Known RBP	4.11	□□□□□ -1.75
IRC6	YFR043C	RPL1A	P0CX43	217 aa	Known RBP	4.11	□□□□□ -1.75
IRC6	YFR043C	RPL1B	P0CX44	217 aa	Known RBP	4.11	□□□□□ -1.75
IRC6	YFR043C	CBS2	P14905	389 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	CPR4	P25334	318 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	CYS4	P32582	507 aa	Known RBP	4.11	□□□□□ -1.75
IRC6	YFR043C	RGT1	P32862	1170 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	BLI1	P35727	113 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	YBR056W	P38081	501 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	STN1	P38960	494 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	SEC28	P40509	296 aa	Known RBP	4.11	□□□□□ -1.75
IRC6	YFR043C	YIL067C	P40514	678 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	EFM4	P40516	257 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	WWM1	P43582	211 aa	Known RBP	4.11	□□□□□ -1.75
IRC6	YFR043C	MDG1	P53885	366 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	HXT11	P54862	567 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	MMT1	Q03218	510 aa		4.11	□□□□□ -1.75
IRC6	YFR043C	RRP9	Q06506	573 aa	Known RBP	4.11	□□□□□ -1.75
IRC6	YFR043C	IMA3	P0CW40	589 aa		4.1	□□□□□ -1.75
IRC6	YFR043C	IMA4	P0CW41	589 aa		4.1	□□□□□ -1.75
IRC6	YFR043C	SPT15	P13393	240 aa	Known RBP	4.1	□□□□□ -1.75
IRC6	YFR043C	MUD1	P32605	298 aa	Known RBP	4.1	□□□□□ -1.75
IRC6	YFR043C	NCA3	P46955	337 aa		4.1	□□□□□ -1.75
IRC6	YFR043C	AZR1	P50080	613 aa		4.1	□□□□□ -1.75
IRC6	YFR043C	PBA1	Q05778	276 aa		4.1	□□□□□ -1.75
IRC6	YFR043C	IMA2	Q08295	589 aa		4.1	□□□□□ -1.75
IRC6	YFR043C	CDC21	P06785	304 aa		4.09	□□□□□ -1.75
IRC6	YFR043C	ALG1	P16661	449 aa		4.09	□□□□□ -1.75
IRC6	YFR043C	PUP2	P32379	260 aa		4.09	□□□□□ -1.75
IRC6	YFR043C	YBL059W	P34224	193 aa		4.09	□□□□□ -1.75
IRC6	YFR043C	SFH5	P47008	294 aa		4.09	□□□□□ -1.75
IRC6	YFR043C	STD1	Q02794	444 aa		4.09	□□□□□ -1.75
IRC6	YFR043C	SMA2	Q04658	369 aa		4.09	□□□□□ -1.75
IRC6	YFR043C	SNT309	Q06091	175 aa	Predicted RBP	4.09	□□□□□ -1.75
IRC6	YFR043C	TPT1	Q12272	230 aa	Known RBP	4.09	□□□□□ -1.75
IRC6	YFR043C	DST1	P07273	309 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	DEG1	P31115	442 aa	Known RBP	4.08	□□□□□ -1.76
IRC6	YFR043C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
IRC6	YFR043C	ATP3	P38077	311 aa	Known RBP	4.08	□□□□□ -1.76
IRC6	YFR043C	INM1	P38710	295 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	YER079W	P40052	210 aa	Known RBP	4.08	□□□□□ -1.76
IRC6	YFR043C	PRM5	P40476	318 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	TOF1	P53840	1238 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	PEX25	Q02969	394 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	HER2	Q03557	464 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	BCH1	Q05029	724 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	TSR1	Q07381	788 aa	Known RBP	4.08	□□□□□ -1.76
IRC6	YFR043C	NSE1	Q07913	336 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	TLG2	Q08144	397 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	ERV2	Q12284	196 aa		4.08	□□□□□ -1.76
IRC6	YFR043C	PHO91	P27514	894 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	RXT2	P38255	430 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	YBR137W	P38276	179 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	NDT80	P38830	627 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	YPI1	P43587	155 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	YGL242C	P53066	181 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	RHO5	P53879	331 aa	Known RBP	4.07	□□□□□ -1.76
IRC6	YFR043C	ELP3	Q02908	557 aa	Known RBP	4.07	□□□□□ -1.76
IRC6	YFR043C	YDR541C	Q03049	344 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	NDL1	Q06568	189 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	YOR387C	Q08910	206 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	CEX1	Q12453	761 aa		4.07	□□□□□ -1.76
IRC6	YFR043C	SUP35	P05453	685 aa	Known RBP	4.06	□□□□□ -1.76
IRC6	YFR043C	RRP7	P25368	297 aa	Predicted RBP	4.06	□□□□□ -1.76
IRC6	YFR043C	ARO2	P28777	376 aa	Known RBP	4.06	□□□□□ -1.76
IRC6	YFR043C	RRP1	P35178	278 aa	Predicted RBP	4.06	□□□□□ -1.76
IRC6	YFR043C	YBR139W	P38109	508 aa		4.06	□□□□□ -1.76
IRC6	YFR043C	AVT5	P38176	459 aa		4.06	□□□□□ -1.76
IRC6	YFR043C	YCL068C	P25593	260 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	SWI3	P32591	825 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
IRC6	YFR043C	GPI16	P38875	610 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	PTH1	P38876	190 aa	Known RBP	4.05	□□□□□ -1.76
IRC6	YFR043C	MMF1	P40185	145 aa	Known RBP	4.05	□□□□□ -1.76
IRC6	YFR043C	JLP2	P40206	208 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	ROG1	P53118	685 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	MLC1	P53141	149 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	SCW10	Q04951	389 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	NDE2	Q07500	545 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	RAX1	Q08760	435 aa		4.05	□□□□□ -1.76
IRC6	YFR043C	TRP1	P00912	224 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	NFT1	P0CE68	1218 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	SKN1	P33336	771 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	CHK1	P38147	527 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	PFF1	P38244	976 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	GDT1	P38301	280 aa	Predicted RBP	4.04	□□□□□ -1.76
IRC6	YFR043C	MLH1	P38920	769 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	REE1	P40893	198 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	PAC11	P40960	533 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	BTN2	P53286	410 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	NCA2	Q12374	616 aa		4.04	□□□□□ -1.76
IRC6	YFR043C	RPL6B	P05739	176 aa	Known RBP	4.03	□□□□□ -1.76
IRC6	YFR043C	NAM9	P27929	486 aa		4.03	□□□□□ -1.76
IRC6	YFR043C	QDR3	P38227	689 aa		4.03	□□□□□ -1.76
IRC6	YFR043C	STP2	P38704	541 aa		4.03	□□□□□ -1.76
IRC6	YFR043C	APE4	P38821	490 aa		4.03	□□□□□ -1.76
IRC6	YFR043C	CHS6	P40955	746 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 55 ms