RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ITGA7Q13683 1181 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 FOXD4L6Q3SYB3 417 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-228ENST00000641847 EARS2Q5JPH6 523 aaKnown RBP10.69□□□□□ -0.7
PHGDH-228ENST00000641847 FAM173BQ6P4H8 233 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 USP17L6PQ6QN14 398 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 FOXD4L3Q6VB84 417 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-228ENST00000641847 NSMFQ6X4W1 530 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 KRT25Q7Z3Z0 450 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 PGBD1Q96JS3 809 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 NOC4LQ9BVI4 516 aaKnown RBP10.69□□□□□ -0.7
PHGDH-228ENST00000641847 AP5M1Q9H0R1 490 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 FBXO40Q9UH90 709 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 ATP6V1DQ9Y5K8 247 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 LCTP09848 1927 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 CCDC194A0A1B0GVG4 234 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 SPDYE3A6NKU9 549 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 MEIS2O14770 477 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 NONOQ15233 471 aaKnown RBP eCLIP10.68□□□□□ -0.7
PHGDH-228ENST00000641847 PUS10Q3MIT2 529 aaKnown RBP10.68□□□□□ -0.7
PHGDH-228ENST00000641847 MYSM1Q5VVJ2 828 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 RNF207Q6ZRF8 634 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 FCHSD1Q86WN1 690 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 TEX2Q8IWB9 1127 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 ANKRD35Q8N283 1001 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 TBC1D5Q92609 795 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 FBXL18Q96ME1 805 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 ANO3Q9BYT9 981 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 A1CFQ9NQ94 594 aaKnown RBP10.68□□□□□ -0.7
PHGDH-228ENST00000641847 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-228ENST00000641847 NOL7Q9UMY1 257 aaKnown RBP10.68□□□□□ -0.7
PHGDH-228ENST00000641847 FAM50BQ9Y247 325 aa10.68□□□□□ -0.7
PHGDH-228ENST00000641847 UMODL1Q5DID0 1318 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 DCXO43602 365 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 FOSP01100 380 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-228ENST00000641847 RFC2P35250 354 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 RPS6P62753 249 aaKnown RBP10.67□□□□□ -0.7
PHGDH-228ENST00000641847 TNFAIP2Q03169 654 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 TAP1Q03518 808 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 GRB10Q13322 594 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 BAATQ14032 418 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-228ENST00000641847 FSCN1Q16658 493 aaKnown RBP10.67□□□□□ -0.7
PHGDH-228ENST00000641847 MCTP2Q6DN12 878 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 CXCL17Q6UXB2 119 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 FAM178BQ8IXR5 827 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 SAMD3Q8N6K7 520 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 SLC43A3Q8NBI5 491 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 SYTL5Q8TDW5 730 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-228ENST00000641847 CHAMP1Q96JM3 812 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 MFSD14AQ96MC6 490 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 TRPV6Q9H1D0 765 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 WNT8AQ9H1J5 351 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 EHMT1Q9H9B1 1298 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 CYP39A1Q9NYL5 469 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 COL20A1Q9P218 1284 aa10.67□□□□□ -0.7
PHGDH-228ENST00000641847 B4GALT4O60513 344 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 NCLP19338 710 aaKnown RBP10.66□□□□□ -0.7
PHGDH-228ENST00000641847 ATP2B1P20020 1258 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 KCNJ6P48051 423 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 NKX3-2P78367 333 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 BEX3Q00994 111 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 DNM1Q05193 864 aaKnown RBP10.66□□□□□ -0.7
PHGDH-228ENST00000641847 NBR1Q14596 966 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 TTLL4Q14679 1199 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 INF2Q27J81 1249 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 LEXMQ3ZCV2 418 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 RILPL1Q5EBL4 403 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 TTC38Q5R3I4 469 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHGDH-228ENST00000641847 DEFB128Q7Z7B8 93 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 HERC6Q8IVU3 1022 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 RETREG2Q8NC44 543 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 TBCKQ8TEA7 893 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 SCLYQ96I15 445 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 ZNF396Q96N95 335 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-228ENST00000641847 ZBED2Q9BTP6 218 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 FTOQ9C0B1 505 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHGDH-228ENST00000641847 MAF1Q9H063 256 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 UBE2ZQ9H832 354 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-228ENST00000641847 CD320Q9NPF0 282 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
PHGDH-228ENST00000641847 LRRC37A2A6NM11 1700 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 MYH7BA7E2Y1 1941 aa10.66□□□□□ -0.7
PHGDH-228ENST00000641847 FRMPD4Q14CM0 1322 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 DNAJC25-GNG10A0A024R161 153 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 EPOPA6NHQ4 379 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 BAG4O95429 457 aaKnown RBP10.65□□□□□ -0.7
PHGDH-228ENST00000641847 KCNA5P22460 613 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 SREBF1P36956 1147 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 TRAPPC10P48553 1259 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 TOB1P50616 345 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-228ENST00000641847 KRT85P78386 507 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 LETM2Q2VYF4 491 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 PTCRAQ6ISU1 281 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-228ENST00000641847 ARMCX2Q7L311 632 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 NEK8Q86SG6 692 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 TLK2Q86UE8 772 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 GBP4Q96PP9 640 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 USP28Q96RU2 1077 aa10.65□□□□□ -0.7
PHGDH-228ENST00000641847 WNT7AO00755 349 aa10.64□□□□□ -0.71
PHGDH-228ENST00000641847 DYNC1LI2O43237 492 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms