RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 VAV3Q9UKW4 847 aa14.7□□□□□ -0.06
PHGDH-221ENST00000641573 PNMA3Q9UL41 463 aa14.7□□□□□ -0.06
PHGDH-221ENST00000641573 ZMYND8Q9ULU4 1186 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-221ENST00000641573 GABRQQ9UN88 632 aa14.7□□□□□ -0.06
PHGDH-221ENST00000641573 SLC45A1Q9Y2W3 748 aa14.7□□□□□ -0.06
PHGDH-221ENST00000641573 BCRP11274 1271 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 MYCLP12524 364 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-221ENST00000641573 ITGB5P18084 799 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 CCND2P30279 289 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 COPB2P35606 906 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 CCT6AP40227 531 aaKnown RBP14.69□□□□□ -0.06
PHGDH-221ENST00000641573 FLT3LGP49771 235 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 MRPS9P82933 396 aaKnown RBP14.69□□□□□ -0.06
PHGDH-221ENST00000641573 SPIRE1Q08AE8 756 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 TMEM119Q4V9L6 283 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 HYIQ5T013 277 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 LRCH2Q5VUJ6 765 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 NCAPH2Q6IBW4 605 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 XRRA1Q6P2D8 792 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 NCAPG2Q86XI2 1143 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 TDHQ8IZJ6 230 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 ERMNQ8TAM6 284 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 SPATA20Q8TB22 786 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 PXYLP1Q8TE99 480 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 NSUN6Q8TEA1 469 aaKnown RBP14.69□□□□□ -0.06
PHGDH-221ENST00000641573 GTF3C2Q8WUA4 911 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-221ENST00000641573 ZNF577Q9BSK1 485 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 NAT10Q9H0A0 1025 aaKnown RBP14.69□□□□□ -0.06
PHGDH-221ENST00000641573 BLZF1Q9H2G9 400 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 TXNRD2Q9NNW7 524 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 JADE2Q9NQC1 790 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 STK17AQ9UEE5 414 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 STK24Q9Y6E0 443 aa14.69□□□□□ -0.06
PHGDH-221ENST00000641573 KDM3AQ9Y4C1 1321 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 TNPO2O14787 897 aaKnown RBP14.68□□□□□ -0.06
PHGDH-221ENST00000641573 PSMD10O75832 226 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 SLC25A27O95847 323 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 CYP2C8P10632 490 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 CUL4BQ13620 913 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 MORC3Q14149 939 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 LUZP1Q86V48 1076 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 ANKRD35Q8N283 1001 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 TRIML1Q8N9V2 468 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 KBTBD4Q9NVX7 518 aa14.68□□□□□ -0.06
PHGDH-221ENST00000641573 PFASO15067 1338 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 GAS7O60861 476 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 MYL1P05976 194 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 NR3C2P08235 984 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 ERCC3P19447 782 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 IRF5Q13568 498 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 IQCB1Q15051 598 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 ECM1Q16610 540 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 Q3C1V9 767 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 HAUS3Q68CZ6 603 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 VSIG10LQ86VR7 867 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 RAD54LQ92698 747 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 GSDMAQ96QA5 445 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 RIT2Q99578 217 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 TEKT3Q9BXF9 490 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 WDR11Q9BZH6 1224 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 CRISPLD2Q9H0B8 497 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 NT5C3AQ9H0P0 336 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 AGO4Q9HCK5 861 aaKnown RBP14.67□□□□□ -0.06
PHGDH-221ENST00000641573 PAK6Q9NQU5 681 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-221ENST00000641573 KCNH7Q9NS40 1196 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 BLOC1S4Q9NUP1 217 aa14.67□□□□□ -0.06
PHGDH-221ENST00000641573 MGAMO43451 1857 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 POTEB2H3BUK9 544 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 IPO5O00410 1097 aaKnown RBP14.66□□□□□ -0.06
PHGDH-221ENST00000641573 EML1O00423 815 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 MED24O75448 989 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 RPN1P04843 607 aaKnown RBP14.66□□□□□ -0.06
PHGDH-221ENST00000641573 BMP6P22004 513 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 AMPD3Q01432 767 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 PPP2R5CQ13362 524 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 MTMR1Q13613 665 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 MCM6Q14566 821 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 SV2BQ7L1I2 683 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.66□□□□□ -0.06
PHGDH-221ENST00000641573 KCNK18Q7Z418 384 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 ANKLE1Q8NAG6 615 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 DIS3LQ8TF46 1054 aaKnown RBP14.66□□□□□ -0.06
PHGDH-221ENST00000641573 LARP4BQ92615 738 aaKnown RBP14.66□□□□□ -0.06
PHGDH-221ENST00000641573 ANP32BQ92688 251 aaKnown RBP14.66□□□□□ -0.06
PHGDH-221ENST00000641573 C7orf25Q9BPX7 421 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 BPIFA3Q9BQP9 254 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 UBE2OQ9C0C9 1292 aaKnown RBP14.66□□□□□ -0.06
PHGDH-221ENST00000641573 PKD2L1Q9P0L9 805 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 KIAA1024Q9UPX6 916 aa14.66□□□□□ -0.06
PHGDH-221ENST00000641573 POTEB3A0JP26 581 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 BECN2A8MW95 431 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 CHMP2AO43633 222 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 SYN1P17600 705 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 RPA1P27694 616 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 MAGEA10P43363 369 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-221ENST00000641573 ERVK-9P63128 1117 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 ERVK-24P63145 666 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 CNTN2Q02246 1040 aa14.65□□□□□ -0.06
PHGDH-221ENST00000641573 DHX8Q14562 1220 aaKnown RBP14.65□□□□□ -0.06
PHGDH-221ENST00000641573 POTEBQ6S5H4 581 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms