RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 CUL5Q93034 780 aa20.89■□□□□ 0.93
VPS72-207ENST00000640458 UPF3BQ9BZI7 483 aaKnown RBP20.89■□□□□ 0.93
VPS72-207ENST00000640458 KCNH6Q9H252 994 aa20.89■□□□□ 0.93
VPS72-207ENST00000640458 SIP14410 1827 aa20.89■□□□□ 0.93
VPS72-207ENST00000640458 FRMPD4Q14CM0 1322 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 POTEB3A0JP26 581 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 EFCAB14O75071 495 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 PDIA3P30101 505 aaKnown RBP20.88■□□□□ 0.93
VPS72-207ENST00000640458 USP17L6PQ6QN14 398 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 POTEBQ6S5H4 581 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 SEPT14Q6ZU15 432 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 HEATR3Q7Z4Q2 680 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 SMARCC2Q8TAQ2 1214 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 MRPL38Q96DV4 380 aaKnown RBP20.88■□□□□ 0.93
VPS72-207ENST00000640458 IL17RAQ96F46 866 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 PSTPIP2Q9H939 334 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 INSL6Q9Y581 213 aa20.88■□□□□ 0.93
VPS72-207ENST00000640458 MMP3P08254 477 aa20.87■□□□□ 0.93
VPS72-207ENST00000640458 MYCLP12524 364 aaPredicted RBP20.87■□□□□ 0.93
VPS72-207ENST00000640458 PTPROQ16827 1216 aa20.87■□□□□ 0.93
VPS72-207ENST00000640458 WWC2Q6AWC2 1192 aa20.87■□□□□ 0.93
VPS72-207ENST00000640458 SESTD1Q86VW0 696 aa20.87■□□□□ 0.93
VPS72-207ENST00000640458 KAT2BQ92831 832 aa20.87■□□□□ 0.93
VPS72-207ENST00000640458 GPKOWQ92917 476 aaPredicted RBP eCLIP20.87■□□□□ 0.93
VPS72-207ENST00000640458 PDRG1Q9NUG6 133 aa20.87■□□□□ 0.93
VPS72-207ENST00000640458 hCG_1984214I3L0E3 225 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 SEC24BO95487 1268 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 CCND2P30279 289 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 RBL2Q08999 1139 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 LY6KQ17RY6 165 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 PPP1R18Q6NYC8 613 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.86■□□□□ 0.93
VPS72-207ENST00000640458 HFE2Q6ZVN8 426 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 ZNF713Q8N859 430 aaPredicted RBP20.86■□□□□ 0.93
VPS72-207ENST00000640458 C7orf31Q8N865 590 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 IL31RAQ8NI17 732 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 ALG1Q9BT22 464 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 HDAC6Q9UBN7 1215 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 FAM50BQ9Y247 325 aa20.86■□□□□ 0.93
VPS72-207ENST00000640458 RGS20O76081 388 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 GH1P01241 217 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 ZP2Q05996 745 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 NTRK3Q16288 839 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 TIGD5Q53EQ6 642 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 TEX2Q8IWB9 1127 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 MYOCDQ8IZQ8 938 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 BANK1Q8NDB2 785 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 ZNF274Q96GC6 653 aaPredicted RBP20.85■□□□□ 0.93
VPS72-207ENST00000640458 BARHL2Q9NY43 387 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 GTF2IRD1Q9UHL9 959 aa20.85■□□□□ 0.93
VPS72-207ENST00000640458 DDX41Q9UJV9 622 aaKnown RBP20.85■□□□□ 0.93
VPS72-207ENST00000640458 STXBP3O00186 592 aa20.84■□□□□ 0.93
VPS72-207ENST00000640458 PRPF3O43395 683 aaKnown RBP20.84■□□□□ 0.93
VPS72-207ENST00000640458 NAPAP54920 295 aa20.84■□□□□ 0.93
VPS72-207ENST00000640458 PFKFB3Q16875 520 aaPredicted RBP20.84■□□□□ 0.93
VPS72-207ENST00000640458 EPC2Q52LR7 807 aa20.84■□□□□ 0.93
VPS72-207ENST00000640458 TCEAL5Q5H9L2 206 aa20.84■□□□□ 0.93
VPS72-207ENST00000640458 ZNF618Q5T7W0 954 aa20.84■□□□□ 0.93
VPS72-207ENST00000640458 TYW1BQ6NUM6 668 aa20.84■□□□□ 0.93
VPS72-207ENST00000640458 KCNV1Q6PIU1 500 aa20.84■□□□□ 0.93
VPS72-207ENST00000640458 PABPC5Q96DU9 382 aaKnown RBP20.84■□□□□ 0.93
VPS72-207ENST00000640458 MRVI1Q9Y6F6 885 aa20.84■□□□□ 0.93
VPS72-207ENST00000640458 LGR5O75473 907 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 STAM2O75886 525 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 AMHP03971 560 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 IFNAR1P17181 557 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 PSEN2P49810 448 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 CCT2P78371 535 aaKnown RBP20.83■□□□□ 0.93
VPS72-207ENST00000640458 MRPS9P82933 396 aaKnown RBP20.83■□□□□ 0.93
VPS72-207ENST00000640458 ARHGAP1Q07960 439 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 PTK7Q13308 1070 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 MBTPS1Q14703 1052 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 XRRA1Q6P2D8 792 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 MFSD14AQ96MC6 490 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 UPF2Q9HAU5 1272 aaKnown RBP20.83■□□□□ 0.93
VPS72-207ENST00000640458 RIC8AQ9NPQ8 531 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 PRKAG3Q9UGI9 489 aa20.83■□□□□ 0.93
VPS72-207ENST00000640458 C19orf67A6NJJ6 358 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 TGFB3P10600 412 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 SCG2P13521 617 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 GPM6BQ13491 265 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 PKN1Q16512 942 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 DGKDQ16760 1214 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 UBE2SQ16763 222 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 C8orf34Q49A92 452 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 PCNX4Q63HM2 1172 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 TRAF7Q6Q0C0 670 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 ADHFE1Q8IWW8 467 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 WNT8BQ93098 351 aa20.82■□□□□ 0.92
VPS72-207ENST00000640458 EMID1Q96A84 441 aaPredicted RBP20.82■□□□□ 0.92
VPS72-207ENST00000640458 ZFP91Q96JP5 570 aaPredicted RBP20.82■□□□□ 0.92
VPS72-207ENST00000640458 LARP6Q9BRS8 491 aaKnown RBP20.82■□□□□ 0.92
VPS72-207ENST00000640458 RNF26Q9BY78 433 aaPredicted RBP20.82■□□□□ 0.92
VPS72-207ENST00000640458 NCOA5Q9HCD5 579 aaKnown RBP20.82■□□□□ 0.92
VPS72-207ENST00000640458 ZNF318Q5VUA4 2279 aa20.81■□□□□ 0.92
VPS72-207ENST00000640458 SMCO2A6NFE2 343 aa20.81■□□□□ 0.92
VPS72-207ENST00000640458 ICAM3P32942 547 aa20.81■□□□□ 0.92
VPS72-207ENST00000640458 IRS1P35568 1242 aa20.81■□□□□ 0.92
VPS72-207ENST00000640458 HTRA4P83105 476 aaPredicted RBP20.81■□□□□ 0.92
VPS72-207ENST00000640458 ZNF200P98182 395 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms