RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PHEXP78562 749 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 SEPT2Q15019 361 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 ARHGEF25Q86VW2 580 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 TMEM206Q9H813 350 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 IPO11Q9UI26 975 aaKnown RBP19.97■□□□□ 0.79
SCARB2-213ENST00000638680 CYP2D7A0A087X1C5 515 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 RSPH3Q86UC2 560 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 PIP4K2CQ8TBX8 421 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 THOC1Q96FV9 657 aaKnown RBP19.96■□□□□ 0.79
SCARB2-213ENST00000638680 BPIFA3Q9BQP9 254 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 NOP53Q9NZM5 478 aaKnown RBP19.96■□□□□ 0.79
SCARB2-213ENST00000638680 PTCH1Q13635 1447 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 ABL1P00519 1130 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 PDE6BP35913 854 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 LIFRP42702 1097 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 DNAJC24Q6P3W2 148 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 RNF169Q8NCN4 708 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 EPC1Q9H2F5 836 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 SEC31BQ9NQW1 1179 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 CA4P22748 312 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.96■□□□□ 0.79
SCARB2-213ENST00000638680 FIS1Q9Y3D6 152 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 hCG_1984214I3L0E3 225 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 UBE2SQ16763 222 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 ZNF713Q8N859 430 aaPredicted RBP19.96■□□□□ 0.79
SCARB2-213ENST00000638680 KCTD6Q8NC69 237 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 DISP1Q96F81 1524 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 TRIM49BA6NDI0 452 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 PPFIA2O75334 1257 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 APOEP02649 317 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 CASP1P29466 404 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 NACC1Q96RE7 527 aa19.96■□□□□ 0.79
SCARB2-213ENST00000638680 NCF2P19878 526 aaPredicted RBP19.95■□□□□ 0.78
SCARB2-213ENST00000638680 ESRRGP62508 458 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 IGBP1P78318 339 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 USP17L2Q6R6M4 530 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 PIH1D3Q9NQM4 214 aaKnown RBP19.95■□□□□ 0.78
SCARB2-213ENST00000638680 ARL6IP4Q66PJ3 421 aaKnown RBP19.95■□□□□ 0.78
SCARB2-213ENST00000638680 ANKRD36BP1Q96IX9 119 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 ESYT2A0FGR8 921 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 TADA3O75528 432 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 PLEKHA8P1O95397 391 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 PLCB4Q15147 1175 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 CCNYQ8ND76 341 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 PRPF31Q8WWY3 499 aaKnown RBP19.95■□□□□ 0.78
SCARB2-213ENST00000638680 OSBPL5Q9H0X9 879 aaPredicted RBP19.95■□□□□ 0.78
SCARB2-213ENST00000638680 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
SCARB2-213ENST00000638680 G3BP2Q9UN86 482 aaKnown RBP19.95■□□□□ 0.78
SCARB2-213ENST00000638680 PFDN6O15212 129 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 BBS9Q3SYG4 887 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 ICE2Q659A1 982 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 DHX40Q8IX18 779 aaKnown RBP19.94■□□□□ 0.78
SCARB2-213ENST00000638680 CALN1Q9BXU9 219 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 MUM1L1Q5H9M0 696 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 PITPNM3Q9BZ71 974 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 ZCCHC17Q9NP64 241 aaKnown RBP19.94■□□□□ 0.78
SCARB2-213ENST00000638680 FAM160B1Q5W0V3 765 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 RAB44Q7Z6P3 723 aaPredicted RBP19.94■□□□□ 0.78
SCARB2-213ENST00000638680 DYNLL2Q96FJ2 89 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 ATG3Q9NT62 314 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 ATP10AO60312 1499 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 CCDC188H7C350 402 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 DDIT3P35638 169 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 BEND6Q5SZJ8 279 aaPredicted RBP19.94■□□□□ 0.78
SCARB2-213ENST00000638680 FMR1NBQ8N0W7 255 aaPredicted RBP19.94■□□□□ 0.78
SCARB2-213ENST00000638680 MORC4Q8TE76 937 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 PDLIM2Q96JY6 352 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 SNX24Q9Y343 169 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 CYTH2Q99418 400 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 PARVGQ9HBI0 331 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 GINM1Q9NU53 330 aa19.94■□□□□ 0.78
SCARB2-213ENST00000638680 GNGT2O14610 69 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 TLR3O15455 904 aaKnown RBP19.93■□□□□ 0.78
SCARB2-213ENST00000638680 RWDD2BP57060 319 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 FAM81BQ96LP2 452 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 DRC3Q9H069 523 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 LGALS16A8MUM7 142 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 CFLARO15519 480 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 MXI1P50539 228 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 TMED1Q13445 227 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 RSBN1LQ6PCB5 846 aaPredicted RBP19.93■□□□□ 0.78
SCARB2-213ENST00000638680 DNAAF3Q8N9W5 541 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 WDR11Q9BZH6 1224 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 USP17L8P0C7I0 530 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 ATP6V0A1Q93050 837 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 SRGAP2BP0DMP2 458 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 RNF207Q6ZRF8 634 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 DEPDC1BQ8WUY9 529 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 CFAP65Q6ZU64 1925 aaKnown RBP19.93■□□□□ 0.78
SCARB2-213ENST00000638680 PYROXD1Q8WU10 500 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 CCDC17Q96LX7 622 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 EFHD1Q9BUP0 239 aa19.93■□□□□ 0.78
SCARB2-213ENST00000638680 MORC2Q9Y6X9 1032 aaPredicted RBP19.93■□□□□ 0.78
SCARB2-213ENST00000638680 PTPREP23469 700 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 GFPT1Q06210 699 aaPredicted RBP19.92■□□□□ 0.78
SCARB2-213ENST00000638680 CENPUQ71F23 418 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 PRR29P0C7W0 189 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 KRT80Q6KB66 452 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms