RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 KAT6AQ92794 2004 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 WDR81Q562E7 1941 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 CCDC194A0A1B0GVG4 234 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 CCNE2O96020 404 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 SMIM10L2AP0DMW4 78 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 SMIM10L2BP0DMW5 78 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 CSF2RAP15509 400 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 ACTR2P61160 394 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 FPGSQ05932 587 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 NONOQ15233 471 aaKnown RBP eCLIP14.22□□□□□ -0.136e-7■■■□□ 17.3
CLN6-225ENST00000638144 KRT40Q6A162 431 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 NIPA1Q7RTP0 329 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 KRT25Q7Z3Z0 450 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 SCLYQ96I15 445 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 PCYT2Q99447 389 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 ZNF577Q9BSK1 485 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 SH2B1Q9NRF2 756 aaPredicted RBP14.22□□□□□ -0.13
CLN6-225ENST00000638144 GTF2IRD1Q9UHL9 959 aa14.22□□□□□ -0.13
CLN6-225ENST00000638144 NFASCO94856 1347 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 IPO5O00410 1097 aaKnown RBP14.21□□□□□ -0.13
CLN6-225ENST00000638144 MSH4O15457 936 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 MAFGO15525 162 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 DHX15O43143 795 aaKnown RBP14.21□□□□□ -0.13
CLN6-225ENST00000638144 ACRP10323 421 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 CIITAP33076 1130 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 KRT2P35908 639 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 SETQ01105 290 aaPredicted RBP14.21□□□□□ -0.13
CLN6-225ENST00000638144 GALNT17Q6IS24 598 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 SEPT1Q8WYJ6 367 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 DHX38Q92620 1227 aaKnown RBP14.21□□□□□ -0.13
CLN6-225ENST00000638144 GLG1Q92896 1179 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 WNT8BQ93098 351 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 TMX3Q96JJ7 454 aa14.21□□□□□ -0.13
CLN6-225ENST00000638144 TET1Q8NFU7 2136 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 SOX1O00570 391 aaPredicted RBP14.2□□□□□ -0.14
CLN6-225ENST00000638144 CHMP2AO43633 222 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 SLC37A4O43826 429 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 MMP1P03956 469 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 BMP8BP34820 402 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 PTPN11Q06124 597 aaPredicted RBP14.2□□□□□ -0.14
CLN6-225ENST00000638144 TRIM29Q14134 588 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 SHHQ15465 462 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 LETM2Q2VYF4 491 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 MFSD5Q6N075 450 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 SESTD1Q86VW0 696 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 DIS3L2Q8IYB7 885 aaKnown RBP14.2□□□□□ -0.14
CLN6-225ENST00000638144 TDHQ8IZJ6 230 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 TNFRSF25Q93038 417 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 ZBTB10Q96DT7 871 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 SEZ6LQ9BYH1 1024 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 RNPEPQ9H4A4 650 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 SETD4Q9NVD3 440 aa14.2□□□□□ -0.14
CLN6-225ENST00000638144 ZNF215Q9UL58 517 aaPredicted RBP14.2□□□□□ -0.14
CLN6-225ENST00000638144 MYH9P35579 1960 aaKnown RBP14.2□□□□□ -0.14
CLN6-225ENST00000638144 SZT2Q5T011 3432 aa14.19□□□□□ -0.14
CLN6-225ENST00000638144 C17orf102A2RUQ5 167 aa14.19□□□□□ -0.14
CLN6-225ENST00000638144 WNT7AO00755 349 aa14.19□□□□□ -0.14
CLN6-225ENST00000638144 SUPT20HL2P0C7V6 817 aa14.19□□□□□ -0.14
CLN6-225ENST00000638144 USP11P51784 963 aa14.19□□□□□ -0.14
CLN6-225ENST00000638144 FAM177A1Q8N128 213 aaPredicted RBP14.19□□□□□ -0.14
CLN6-225ENST00000638144 LMBR1Q8WVP7 490 aa14.19□□□□□ -0.14
CLN6-225ENST00000638144 C8orf76Q96K31 380 aa14.19□□□□□ -0.14
CLN6-225ENST00000638144 LLPHQ9BRT6 129 aaKnown RBP14.19□□□□□ -0.14
CLN6-225ENST00000638144 BRMS1Q9HCU9 246 aa14.19□□□□□ -0.14
CLN6-225ENST00000638144 EMSYQ7Z589 1322 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 BACH1O14867 736 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 TREHO43280 583 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 LGR5O75473 907 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 FXR1P51114 621 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLN6-225ENST00000638144 IGBP1P78318 339 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 PPFIA1Q13136 1202 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 LRCH2Q5VUJ6 765 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 C16orf59Q7L2K0 433 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 TRMT1LQ7Z2T5 733 aaKnown RBP14.18□□□□□ -0.14
CLN6-225ENST00000638144 DEFB128Q7Z7B8 93 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 NEK8Q86SG6 692 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 CCDC60Q8IWA6 550 aaPredicted RBP14.18□□□□□ -0.14
CLN6-225ENST00000638144 TMEM199Q8N511 208 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 FAM184AQ8NB25 1140 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 TRAPPC12Q8WVT3 735 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 ATP6V0A1Q93050 837 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 LRCH3Q96II8 777 aa14.18□□□□□ -0.14
CLN6-225ENST00000638144 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLN6-225ENST00000638144 DDX25Q9UHL0 483 aaKnown RBP14.18□□□□□ -0.14
CLN6-225ENST00000638144 CCNT1O60563 726 aaKnown RBP14.17□□□□□ -0.14
CLN6-225ENST00000638144 GAS7O60861 476 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 ATP2B1P20020 1258 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 HMGN5P82970 282 aaKnown RBP14.17□□□□□ -0.14
CLN6-225ENST00000638144 PPIGQ13427 754 aaKnown RBP eCLIP14.17□□□□□ -0.147e-7■□□□□ 9.4
CLN6-225ENST00000638144 Q4G0T1 1027 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 ABHD15Q6UXT9 468 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 SLC5A5Q92911 643 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 VWCEQ96DN2 955 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 UNC45AQ9H3U1 944 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 SMARCAD1Q9H4L7 1026 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 AZI2Q9H6S1 392 aa14.17□□□□□ -0.14
CLN6-225ENST00000638144 TBC1D22BQ9NU19 505 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms