RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SP4Q02446 784 aa9□□□□□ -0.97
PNKP-229ENST00000637897 MGAT3Q09327 533 aa9□□□□□ -0.97
PNKP-229ENST00000637897 BFSP2Q13515 415 aa9□□□□□ -0.97
PNKP-229ENST00000637897 TOB2Q14106 344 aaPredicted RBP9□□□□□ -0.97
PNKP-229ENST00000637897 NEDD9Q14511 834 aa9□□□□□ -0.97
PNKP-229ENST00000637897 RAB30Q15771 203 aa9□□□□□ -0.97
PNKP-229ENST00000637897 RTN1Q16799 776 aa9□□□□□ -0.97
PNKP-229ENST00000637897 Q6ZUG5 572 aa9□□□□□ -0.97
PNKP-229ENST00000637897 HEATR3Q7Z4Q2 680 aa9□□□□□ -0.97
PNKP-229ENST00000637897 C7orf31Q8N865 590 aa9□□□□□ -0.97
PNKP-229ENST00000637897 RETREG2Q8NC44 543 aa9□□□□□ -0.97
PNKP-229ENST00000637897 DBF4BQ8NFT6 615 aa9□□□□□ -0.97
PNKP-229ENST00000637897 LMBR1Q8WVP7 490 aa9□□□□□ -0.97
PNKP-229ENST00000637897 GPRASP2Q96D09 838 aa9□□□□□ -0.97
PNKP-229ENST00000637897 C22orf23Q9BZE7 217 aa9□□□□□ -0.97
PNKP-229ENST00000637897 RIC8AQ9NPQ8 531 aa9□□□□□ -0.97
PNKP-229ENST00000637897 BARHL2Q9NY43 387 aa9□□□□□ -0.97
PNKP-229ENST00000637897 PKD2L1Q9P0L9 805 aa9□□□□□ -0.97
PNKP-229ENST00000637897 MYO7AQ13402 2215 aa9□□□□□ -0.97
PNKP-229ENST00000637897 IGLV3-22A0A075B6J6 115 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.99□□□□□ -0.97
PNKP-229ENST00000637897 C17orf102A2RUQ5 167 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 GOLGA8AA7E2F4 631 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 GOLGA8BA8MQT2 603 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 CHRNA1P02708 482 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 LINC00271P0C7V0 271 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 POU3F3P20264 500 aaPredicted RBP8.99□□□□□ -0.97
PNKP-229ENST00000637897 RPS6KB1P23443 525 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 TCF7P36402 384 aaPredicted RBP8.99□□□□□ -0.97
PNKP-229ENST00000637897 TRAF1Q13077 416 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 NPY5RQ15761 445 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 PLEKHG4Q58EX7 1191 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 UTP14CQ5TAP6 766 aaKnown RBP8.99□□□□□ -0.97
PNKP-229ENST00000637897 XRRA1Q6P2D8 792 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 CNKSR3Q6P9H4 555 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 PHOSPHO2Q8TCD6 241 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 BRF1Q92994 677 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 ATP6V0A1Q93050 837 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 JAKMIP1Q96N16 626 aaKnown RBP8.99□□□□□ -0.97
PNKP-229ENST00000637897 UIMC1Q96RL1 719 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 SLC9A7Q96T83 725 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 MXRA8Q9BRK3 442 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 LARP6Q9BRS8 491 aaKnown RBP8.99□□□□□ -0.97
PNKP-229ENST00000637897 KATNAL1Q9BW62 490 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 USP26Q9BXU7 913 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 ANO3Q9BYT9 981 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 FTOQ9C0B1 505 aaKnown RBP eCLIP8.99□□□□□ -0.97
PNKP-229ENST00000637897 KCNH7Q9NS40 1196 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 RBM28Q9NW13 759 aaKnown RBP8.99□□□□□ -0.97
PNKP-229ENST00000637897 SEC63Q9UGP8 760 aaKnown RBP8.99□□□□□ -0.97
PNKP-229ENST00000637897 MSRAQ9UJ68 235 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 NOD1Q9Y239 953 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 MTCH2Q9Y6C9 303 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 NCOR1O75376 2440 aa8.99□□□□□ -0.97
PNKP-229ENST00000637897 COL4A4P53420 1690 aaPredicted RBP8.98□□□□□ -0.97
PNKP-229ENST00000637897 IGKV6D-21A0A0A0MT36 114 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 MBLAC1A4D2B0 266 aaPredicted RBP8.98□□□□□ -0.97
PNKP-229ENST00000637897 SMCO2A6NFE2 343 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 MEIS1O00470 390 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 BAIAP3O94812 1187 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 ATG7O95352 703 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 GJB5O95377 273 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 CTSHP09668 335 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 ATP4AP20648 1035 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 PDIA3P30101 505 aaKnown RBP8.98□□□□□ -0.97
PNKP-229ENST00000637897 SREBF1P36956 1147 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 THPOP40225 353 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 RBM25P49756 843 aaKnown RBP8.98□□□□□ -0.97
PNKP-229ENST00000637897 RCAN1P53805 252 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 CCDC85BQ15834 202 aaPredicted RBP8.98□□□□□ -0.97
PNKP-229ENST00000637897 PFKFB3Q16875 520 aaPredicted RBP8.98□□□□□ -0.97
PNKP-229ENST00000637897 GNPTABQ3T906 1256 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 FAM26DQ5JW98 314 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 RNF20Q5VTR2 975 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 PPP2R2DQ66LE6 453 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 RASGRP4Q8TDF6 673 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 LINC01599Q8WXQ3 324 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 PHKBQ93100 1093 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 LENG9Q96B70 501 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 EHMT1Q9H9B1 1298 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 SLC28A3Q9HAS3 691 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 NCOA5Q9HCD5 579 aaKnown RBP8.98□□□□□ -0.97
PNKP-229ENST00000637897 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
PNKP-229ENST00000637897 AGO4Q9HCK5 861 aaKnown RBP8.98□□□□□ -0.97
PNKP-229ENST00000637897 KAT6AQ92794 2004 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 RSPH10B2B2RC85 870 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 ZBTB42B2RXF5 422 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 PRPF3O43395 683 aaKnown RBP8.97□□□□□ -0.97
PNKP-229ENST00000637897 RSPH10BP0C881 870 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 MARK3P27448 753 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 NAPAP54920 295 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 GRB10Q13322 594 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 MTMR1Q13613 665 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 JAKMIP3Q5VZ66 844 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 PPP1R18Q6NYC8 613 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 RPAINQ86UA6 219 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 RTN4RL1Q86UN2 441 aaPredicted RBP8.97□□□□□ -0.97
PNKP-229ENST00000637897 NLRX1Q86UT6 975 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 CRIPAKQ8N1N5 446 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 TRAPPC12Q8WVT3 735 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms