RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 POTEB3A0JP26 581 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 BIN1O00499 593 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
CLN6-219ENST00000637329 STRNO43815 780 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 PEX10O60683 326 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 MED24O75448 989 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 EIF3JO75822 258 aaKnown RBP17.17■□□□□ 0.34
CLN6-219ENST00000637329 RPN1P04843 607 aaKnown RBP17.17■□□□□ 0.34
CLN6-219ENST00000637329 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.34
CLN6-219ENST00000637329 SFNP31947 248 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 JAK3P52333 1124 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 CNTN2Q02246 1040 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 ITGB3BPQ13352 177 aaPredicted RBP17.17■□□□□ 0.34
CLN6-219ENST00000637329 CUL4BQ13620 913 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 Q3C1V9 767 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 POTEBQ6S5H4 581 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 CATSPER3Q86XQ3 398 aa17.17■□□□□ 0.34
CLN6-219ENST00000637329 SOWAHBA6NEL2 793 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 FAM155AB1AL88 458 aaPredicted RBP17.16■□□□□ 0.34
CLN6-219ENST00000637329 IKBKBO14920 756 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 SPATA31C1P0DKV0 1188 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 MAPK4P31152 587 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 PDE4DQ08499 809 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 IQCB1Q15051 598 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 ZNF746Q6NUN9 644 aaPredicted RBP17.16■□□□□ 0.34
CLN6-219ENST00000637329 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 MORC4Q8TE76 937 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 PLIN2Q99541 437 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 HSD17B14Q9BPX1 270 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 SENP7Q9BQF6 1050 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 PORCNQ9H237 461 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 KIAA1024Q9UPX6 916 aa17.16■□□□□ 0.34
CLN6-219ENST00000637329 PVALEFA0A1B0GWK0 134 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 POTEFA5A3E0 1075 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 WDR64B1ANS9 1081 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 SPATA31C2B4DYI2 1134 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 EML1O00423 815 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 IGF2BP3O00425 579 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLN6-219ENST00000637329 CHMP2AO43633 222 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 RGS20O76081 388 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 RHOBTB3O94955 611 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 MCM6Q14566 821 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 ECM1Q16610 540 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 POTEGQ6S5H5 508 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 MIER3Q7Z3K6 550 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 KCNK18Q7Z418 384 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 SMAP1Q8IYB5 467 aaPredicted RBP17.15■□□□□ 0.34
CLN6-219ENST00000637329 BLZF1Q9H2G9 400 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 IVNS1ABPQ9Y6Y0 642 aa17.15■□□□□ 0.34
CLN6-219ENST00000637329 GOLGA6L19H0YKK7 550 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 KCNA2P16389 499 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 BMP6P22004 513 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 PPP1R2P41236 205 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 TAF1CQ15572 869 aaPredicted RBP17.14■□□□□ 0.33
CLN6-219ENST00000637329 ZNF658Q5TYW1 1059 aaPredicted RBP17.14■□□□□ 0.33
CLN6-219ENST00000637329 WDR78Q5VTH9 848 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 KCNV1Q6PIU1 500 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 ZNF467Q7Z7K2 595 aaPredicted RBP17.14■□□□□ 0.33
CLN6-219ENST00000637329 IFNL1Q8IU54 200 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 GIMAP8Q8ND71 665 aaPredicted RBP17.14■□□□□ 0.33
CLN6-219ENST00000637329 STAMQ92783 540 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 ZFP91Q96JP5 570 aaPredicted RBP17.14■□□□□ 0.33
CLN6-219ENST00000637329 FGD4Q96M96 766 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 UIMC1Q96RL1 719 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 EFCC1Q9HA90 598 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 EXOC1Q9NV70 894 aa17.14■□□□□ 0.33
CLN6-219ENST00000637329 ASB14A6NK59 587 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 SMTNL1A8MU46 457 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 BECN2A8MW95 431 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 KLRC4O43908 158 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 LYPLA2O95372 231 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 EYA4O95677 639 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
CLN6-219ENST00000637329 PLA2G4BP0C869 781 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 TGFB3P10600 412 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
CLN6-219ENST00000637329 CASP1P29466 404 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 SLC12A3P55017 1021 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 TPM4P67936 248 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 ASIC1P78348 528 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 MYL5Q02045 173 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 COBLL1Q53SF7 1204 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 UNC13DQ70J99 1090 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 LUZP1Q86V48 1076 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 DHX40Q8IX18 779 aaKnown RBP17.13■□□□□ 0.33
CLN6-219ENST00000637329 SYT2Q8N9I0 419 aaPredicted RBP17.13■□□□□ 0.33
CLN6-219ENST00000637329 DYDC2Q96IM9 177 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 LXNQ9BS40 222 aa17.13■□□□□ 0.33
CLN6-219ENST00000637329 BMP2KQ9NSY1 1161 aaPredicted RBP17.13■□□□□ 0.33
CLN6-219ENST00000637329 KIAA1217Q5T5P2 1943 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 A0A087WWV3 80 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 MYMKA6NI61 221 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 E9PMD0 336 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 DKC1O60832 514 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLN6-219ENST00000637329 SLITRK3O94933 977 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 PGK2P07205 417 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 ADORA2AP29274 412 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 CYP4A11Q02928 519 aa17.12■□□□□ 0.33
CLN6-219ENST00000637329 GRB14Q14449 540 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms