RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 TBC1D22BQ9NU19 505 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 LAMA3Q16787 3333 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 MARCH6O60337 910 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 NEMFO60524 1076 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 GAS7O60861 476 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 CCNE2O96020 404 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 TRAPPC10P48553 1259 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 TOB1P50616 345 aaPredicted RBP19.45■□□□□ 0.7
CLN6-218ENST00000637223 PSMC6P62333 389 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 UTP14CQ5TAP6 766 aaKnown RBP19.45■□□□□ 0.7
CLN6-218ENST00000637223 LRCH2Q5VUJ6 765 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 MTG1Q9BT17 334 aaPredicted RBP19.45■□□□□ 0.7
CLN6-218ENST00000637223 KCNMB3Q9NPA1 279 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 MTMR10Q9NXD2 777 aa19.45■□□□□ 0.7
CLN6-218ENST00000637223 ZMYND8Q9ULU4 1186 aaPredicted RBP19.45■□□□□ 0.7
CLN6-218ENST00000637223 GSTTP1A0A1W2PQM5 241 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 KPNA6O60684 536 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 PPFIA4O75335 1185 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 HOXD8P13378 290 aaPredicted RBP19.44■□□□□ 0.7
CLN6-218ENST00000637223 TCF7P36402 384 aaPredicted RBP19.44■□□□□ 0.7
CLN6-218ENST00000637223 CHMP4BP1P59074 171 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 ACTR2P61160 394 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 RESTQ13127 1097 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 CALCRLQ16602 461 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 C7orf61Q8IZ16 206 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 PPP1R13LQ8WUF5 828 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 SEPT1Q8WYJ6 367 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 HAS1Q92839 578 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 RIT2Q99578 217 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 TEKT3Q9BXF9 490 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 TCEAL9Q9UHQ7 104 aa19.44■□□□□ 0.7
CLN6-218ENST00000637223 CHMP2AO43633 222 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 PSMD10O75832 226 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 CABYRO75952 493 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 LGALS2P05162 132 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 FOXD4L5Q5VV16 416 aaPredicted RBP19.43■□□□□ 0.7
CLN6-218ENST00000637223 BRAPQ7Z569 592 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 TRIM50Q86XT4 487 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 FOXD4L4Q8WXT5 416 aaPredicted RBP19.43■□□□□ 0.7
CLN6-218ENST00000637223 KAT2BQ92831 832 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 FAM20AQ96MK3 541 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 TMEM60Q9H2L4 133 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 UNC45AQ9H3U1 944 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 PCDHB6Q9Y5E3 794 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 ELP1O95163 1332 aa19.43■□□□□ 0.7
CLN6-218ENST00000637223 TBX3O15119 743 aa19.42■□□□□ 0.7
CLN6-218ENST00000637223 KRT76Q01546 638 aa19.42■□□□□ 0.7
CLN6-218ENST00000637223 LRRC26Q2I0M4 334 aa19.42■□□□□ 0.7
CLN6-218ENST00000637223 RILPL1Q5EBL4 403 aa19.42■□□□□ 0.7
CLN6-218ENST00000637223 ZNF746Q6NUN9 644 aaPredicted RBP19.42■□□□□ 0.7
CLN6-218ENST00000637223 SLC39A5Q6ZMH5 540 aa19.42■□□□□ 0.7
CLN6-218ENST00000637223 C16orf70Q9BSU1 422 aa19.42■□□□□ 0.7
CLN6-218ENST00000637223 A0A0U1RQG5 324 aaPredicted RBP19.41■□□□□ 0.7
CLN6-218ENST00000637223 BAG4O95429 457 aaKnown RBP19.41■□□□□ 0.7
CLN6-218ENST00000637223 F2P00734 622 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 SYN1P17600 705 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 PSEN2P49810 448 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 ITGA7Q13683 1181 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 PKP1Q13835 747 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 LRIT3Q3SXY7 679 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 FAM173BQ6P4H8 233 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 GRIN2DO15399 1336 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 ALPK3Q96L96 1907 aa19.41■□□□□ 0.7
CLN6-218ENST00000637223 ATG7O95352 703 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 SUPT20HL2P0C7V6 817 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 TXKP42681 527 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 ORC2Q13416 577 aaPredicted RBP19.4■□□□□ 0.7
CLN6-218ENST00000637223 MFSD10Q14728 455 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 NBPF20Q3BBV1 942 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 MIS18BP1Q6P0N0 1132 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 ABHD15Q6UXT9 468 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 SMAP1Q8IYB5 467 aaPredicted RBP19.4■□□□□ 0.7
CLN6-218ENST00000637223 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 MTMR9Q96QG7 549 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 PCYT2Q99447 389 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.4■□□□□ 0.7
CLN6-218ENST00000637223 VAV3Q9UKW4 847 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 SAMM50Q9Y512 469 aa19.4■□□□□ 0.7
CLN6-218ENST00000637223 WDR64B1ANS9 1081 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 H3BRB1 525 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 ARVCFO00192 962 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 BACH1O14867 736 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 OR52Z1P0C646 297 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 ZSCAN22P10073 491 aaPredicted RBP19.39■□□□□ 0.69
CLN6-218ENST00000637223 RTP1P59025 263 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 KIAA0753Q2KHM9 967 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 TRIM60Q495X7 471 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 FAM47CQ5HY64 1035 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 B3GNT9Q6UX72 402 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 MIER3Q7Z3K6 550 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 TDHQ8IZJ6 230 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 GLG1Q92896 1179 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 KATNAL1Q9BW62 490 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.69
CLN6-218ENST00000637223 TUT1Q9H6E5 874 aaKnown RBP19.39■□□□□ 0.69
CLN6-218ENST00000637223 AZI2Q9H6S1 392 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 DISC1Q9NRI5 854 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 ATP11BQ9Y2G3 1177 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 PCDHA10Q9Y5I2 948 aa19.39■□□□□ 0.69
CLN6-218ENST00000637223 DOCK5Q9H7D0 1870 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms