RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 VPS33BQ9H267 617 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 CAAP1Q9H8G2 361 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 RMI1Q9H9A7 625 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 DBNDD1Q9H9R9 158 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 PLEKHA5Q9HAU0 1116 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 DIAPH3Q9NSV4 1193 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 GINM1Q9NU53 330 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 PDRG1Q9NUG6 133 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 MRGBPQ9NV56 204 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 CGNQ9P2M7 1197 aaKnown RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 STAP2Q9UGK3 403 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 PNMA8BQ9ULN7 279 aaPredicted RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 YBX2Q9Y2T7 364 aaKnown RBP3.49□□□□□ -1.85
VIM-210ENST00000637053 TTLL3Q9Y4R7 772 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 CD2APQ9Y5K6 639 aa3.49□□□□□ -1.85
VIM-210ENST00000637053 ZCCHC6Q5VYS8 1495 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 E2F8A0AVK6 867 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 ANO9A1A5B4 782 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 TRIM64A6NGJ6 449 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 TRIM64BA6NI03 449 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 FAM25EA8MYX2 175 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 RFXAPO00287 272 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 FOXN3O00409 490 aaPredicted RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 APAF1O14727 1248 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 GPR182O15218 404 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 CTAGE5O15320 804 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 CPNE3O75131 537 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 BBOX1O75936 387 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 IPO7O95373 1038 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 ASMTLO95671 621 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 ZGLP1P0C6A0 271 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 SETSIPP0DME0 302 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 MYCLP1P12525 358 aaPredicted RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 SKILP12757 684 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 ENPP1P22413 925 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 IL4RP24394 825 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 SOX5P35711 763 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 RAD52P43351 418 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 GALK1P51570 392 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 AFF3P51826 1226 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 GTF2A2P52657 109 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 SH3BGRP55822 239 aaPredicted RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 ZNF280AP59817 542 aaPredicted RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 UBXN2AP68543 259 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 PPP2R5CQ13362 524 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 PKN2Q16513 984 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 NKG7Q16617 165 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 C21orf62-AS1Q17RA5 79 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 TTC31Q49AM3 519 aaPredicted RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 C2orf27AQ580R0 203 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 RILPL1Q5EBL4 403 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 ARMC4Q5T2S8 1044 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 ALG1LQ6GMV1 187 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 C1orf228Q6PIY5 440 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 CCBE1Q6UXH8 406 aaPredicted RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 CYP26C1Q6V0L0 522 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 CDC37L1Q7L3B6 337 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 RTL10Q7L3V2 364 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 NKAPQ8N5F7 415 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 UBR7Q8N806 425 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 MNS1Q8NEH6 495 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 IL17REQ8NFR9 667 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 AFAP1L1Q8TED9 768 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 SMCR8Q8TEV9 937 aaPredicted RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 GJA10Q969M2 543 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 SNX21Q969T3 373 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 ATP6V1E2Q96A05 226 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 CCDC74AQ96AQ1 378 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 SHISA4Q96DD7 197 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 MFSD3Q96ES6 412 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 ACSBG1Q96GR2 724 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 TBATAQ96M53 351 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 TEPSINQ96N21 525 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 CITED4Q96RK1 184 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 CAMKK2Q96RR4 588 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 PRKRIP1Q9H875 184 aaPredicted RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 KIAA1586Q9HCI6 787 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 AASDHPPTQ9NRN7 309 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 RASSF1Q9NS23 344 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 CHCHD3Q9NX63 227 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 TRMT1Q9NXH9 659 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 EPS15L1Q9UBC2 864 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 ZNF180Q9UJW8 692 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 GTF3C4Q9UKN8 822 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 PA2G4Q9UQ80 394 aaKnown RBP3.48□□□□□ -1.85
VIM-210ENST00000637053 MYRFQ9Y2G1 1151 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 AFG3L2Q9Y4W6 797 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 PCDHGB3Q9Y5G1 929 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 AK5Q9Y6K8 562 aa3.48□□□□□ -1.85
VIM-210ENST00000637053 A0A087X0B3 334 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PNMA6FA0A0J9YX94 578 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 GADD45BO75293 160 aaPredicted RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 EFEMP2O95967 443 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 KCNA6P17658 529 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 BMP6P22004 513 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 NME2P22392 152 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 HOXD10P28358 340 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 STIP1P31948 543 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 HPDP32754 393 aaPredicted RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 CTNNA1P35221 906 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms