RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KBTBD13C9JR72 458 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 DNM1LO00429 736 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 ZEB2O60315 1214 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 TXKP42681 527 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 ATP2C1P98194 919 aaPredicted RBP18.05■□□□□ 0.48
CLN6-216ENST00000636876 KCNA10Q16322 511 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 DGKDQ16760 1214 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 FOXD4L6Q3SYB3 417 aaPredicted RBP18.05■□□□□ 0.48
CLN6-216ENST00000636876 B3GNT9Q6UX72 402 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 FOXD4L3Q6VB84 417 aaPredicted RBP18.05■□□□□ 0.48
CLN6-216ENST00000636876 ANKLE1Q8NAG6 615 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 PCSK9Q8NBP7 692 aaKnown RBP18.05■□□□□ 0.48
CLN6-216ENST00000636876 SEPT1Q8WYJ6 367 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 TSEN34Q9BSV6 310 aaKnown RBP18.05■□□□□ 0.48
CLN6-216ENST00000636876 CHMP5Q9NZZ3 219 aa18.05■□□□□ 0.48
CLN6-216ENST00000636876 DNAH12Q6ZR08 3092 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 KPNA6O60684 536 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 PPFIA4O75335 1185 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 PRPHP41219 470 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 MNX1P50219 401 aaPredicted RBP18.04■□□□□ 0.48
CLN6-216ENST00000636876 PPP2R5CQ13362 524 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 PTPAQ15257 358 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 ATL3Q6DD88 541 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 TTC12Q9H892 705 aaPredicted RBP18.04■□□□□ 0.48
CLN6-216ENST00000636876 POLR3EQ9NVU0 708 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 TFIP11Q9UBB9 837 aaKnown RBP18.04■□□□□ 0.48
CLN6-216ENST00000636876 PCDHA12Q9UN75 941 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 ATP6V1DQ9Y5K8 247 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 CEP290O15078 2479 aa18.04■□□□□ 0.48
CLN6-216ENST00000636876 MOXD2PA6NHM9 499 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 WDR64B1ANS9 1081 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 CHMP2AO43633 222 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 ATG7O95352 703 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 ASGR1P07306 291 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 MYL3P08590 195 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 EN2P19622 333 aaPredicted RBP18.03■□□□□ 0.48
CLN6-216ENST00000636876 TCF7P36402 384 aaPredicted RBP18.03■□□□□ 0.48
CLN6-216ENST00000636876 NASPP49321 788 aaPredicted RBP18.03■□□□□ 0.48
CLN6-216ENST00000636876 JAK3P52333 1124 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 ACLYP53396 1101 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 CEBPZQ03701 1054 aaKnown RBP18.03■□□□□ 0.48
CLN6-216ENST00000636876 SPIRE1Q08AE8 756 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 ARL6IP4Q66PJ3 421 aaKnown RBP18.03■□□□□ 0.48
CLN6-216ENST00000636876 ABHD15Q6UXT9 468 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 SMAP1Q8IYB5 467 aaPredicted RBP18.03■□□□□ 0.48
CLN6-216ENST00000636876 RDM1Q8NG50 284 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 DISC1Q9NRI5 854 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 PHF24Q9UPV7 400 aa18.03■□□□□ 0.48
CLN6-216ENST00000636876 EML1O00423 815 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 LGR5O75473 907 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 LGALS2P05162 132 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 SUPT20HL2P0C7V6 817 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 SFNP31947 248 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 FXR2P51116 673 aaKnown RBP eCLIP18.02■□□□□ 0.48
CLN6-216ENST00000636876 PURAQ00577 322 aaKnown RBP18.02■□□□□ 0.48
CLN6-216ENST00000636876 DNM1Q05193 864 aaKnown RBP18.02■□□□□ 0.48
CLN6-216ENST00000636876 TMEM266Q2M3C6 531 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 UTP14CQ5TAP6 766 aaKnown RBP18.02■□□□□ 0.48
CLN6-216ENST00000636876 NCAPH2Q6IBW4 605 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 MIS18BP1Q6P0N0 1132 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 MIER3Q7Z3K6 550 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 PCDHA10Q9Y5I2 948 aa18.02■□□□□ 0.48
CLN6-216ENST00000636876 MORC2Q9Y6X9 1032 aaPredicted RBP18.02■□□□□ 0.48
CLN6-216ENST00000636876 IGKV6D-21A0A0A0MT36 114 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 YEATS4O95619 227 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 PSAPP07602 524 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 ZNF286BP0CG31 522 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 TECP42680 631 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 SLC39A14Q15043 492 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 CXCL17Q6UXB2 119 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 DTHD1Q6ZMT9 781 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 LINC00301Q8NCQ3 95 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 PCYT2Q99447 389 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 MTG1Q9BT17 334 aaPredicted RBP18.01■□□□□ 0.47
CLN6-216ENST00000636876 CFAP45Q9UL16 551 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 SAMM50Q9Y512 469 aa18.01■□□□□ 0.47
CLN6-216ENST00000636876 EMSYQ7Z589 1322 aa18■□□□□ 0.47
CLN6-216ENST00000636876 A0A1W2PQ45 241 aaPredicted RBP18■□□□□ 0.47
CLN6-216ENST00000636876 A0A1W2PQY0 241 aa18■□□□□ 0.47
CLN6-216ENST00000636876 POTEMA6NI47 508 aa18■□□□□ 0.47
CLN6-216ENST00000636876 CABYRO75952 493 aa18■□□□□ 0.47
CLN6-216ENST00000636876 F2P00734 622 aa18■□□□□ 0.47
CLN6-216ENST00000636876 STK38Q15208 465 aa18■□□□□ 0.47
CLN6-216ENST00000636876 IL17AQ16552 155 aa18■□□□□ 0.47
CLN6-216ENST00000636876 TRIM50Q86XT4 487 aa18■□□□□ 0.47
CLN6-216ENST00000636876 CCDC60Q8IWA6 550 aaPredicted RBP18■□□□□ 0.47
CLN6-216ENST00000636876 DIS3LQ8TF46 1054 aaKnown RBP18■□□□□ 0.47
CLN6-216ENST00000636876 KAT2BQ92831 832 aa18■□□□□ 0.47
CLN6-216ENST00000636876 C16orf70Q9BSU1 422 aa18■□□□□ 0.47
CLN6-216ENST00000636876 SCN10AQ9Y5Y9 1956 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 BACH1O14867 736 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 COL6A1P12109 1028 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 MARCKSP29966 332 aaPredicted RBP17.99■□□□□ 0.47
CLN6-216ENST00000636876 KRT85P78386 507 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 PDIA5Q14554 519 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 EPHA7Q15375 998 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 FAM160B1Q5W0V3 765 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 SWSAP1Q6NVH7 229 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 IGSF22Q8N9C0 903 aa17.99■□□□□ 0.47
CLN6-216ENST00000636876 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms