RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 MCM9Q9NXL9 1143 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 RNF14Q9UBS8 474 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 SUGT1Q9Y2Z0 365 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHD2-223ENST00000636306 SYNRGQ9UMZ2 1314 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 ANKRD31Q8N7Z5 1873 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 E7ENQ6 273 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 PENKP01210 267 aaPredicted RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 KRT14P02533 472 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 TPP2P29144 1249 aaPredicted RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 KRT9P35527 623 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 KRT2P35908 639 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 HSPA9P38646 679 aaKnown RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 ABL2P42684 1182 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 GPSM2P81274 684 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 QPCTQ16769 361 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 TMTC3Q6ZXV5 915 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 SESTD1Q86VW0 696 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 DGKHQ86XP1 1220 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 AIFM3Q96NN9 605 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 NUP88Q99567 741 aaPredicted RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 KLRG2A4D1S0 409 aaPredicted RBP11.78□□□□□ -0.52
CHD2-223ENST00000636306 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
CHD2-223ENST00000636306 PPEF1O14829 653 aaPredicted RBP11.78□□□□□ -0.52
CHD2-223ENST00000636306 ASAP2O43150 1006 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 IDEP14735 1019 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 NQO1P15559 274 aaKnown RBP11.78□□□□□ -0.52
CHD2-223ENST00000636306 CUL4BQ13620 913 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 DBN1Q16643 649 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 GNPTABQ3T906 1256 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 C12orf60Q5U649 245 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 NKX2-3Q8TAU0 364 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 NAF1Q96HR8 494 aaKnown RBP11.78□□□□□ -0.52
CHD2-223ENST00000636306 ZWILCHQ9H900 591 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 CNOT10Q9H9A5 744 aaKnown RBP11.78□□□□□ -0.52
CHD2-223ENST00000636306 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.78□□□□□ -0.522e-6■■■□□ 18.2
CHD2-223ENST00000636306 ZNF232Q9UNY5 417 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 HYOU1Q9Y4L1 999 aa11.78□□□□□ -0.52
CHD2-223ENST00000636306 DPPA5A6NC42 116 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.52
CHD2-223ENST00000636306 TACC1O75410 805 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 CLTAP09496 248 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 MYZAPP0CAP1 466 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 CALML3P27482 149 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 PAFAH1B1P43034 410 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 PSMC4P43686 418 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 PPP2R2AP63151 447 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 TAF11Q15544 211 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.52
CHD2-223ENST00000636306 PPP1R15BQ5SWA1 713 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 ACBD5Q5T8D3 534 aaPredicted RBP11.77□□□□□ -0.52
CHD2-223ENST00000636306 C8orf74Q6P047 294 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 CPLX4Q7Z7G2 160 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 TXNRD3Q86VQ6 643 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 SP8Q8IXZ3 490 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.52
CHD2-223ENST00000636306 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 RAPGEF5Q92565 580 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 DNAJC7Q99615 494 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 MKNK2Q9HBH9 465 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 GOPCQ9HD26 462 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 TRIM10Q9UDY6 481 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 LRRC42Q9Y546 428 aa11.77□□□□□ -0.52
CHD2-223ENST00000636306 FAM205AQ6ZU69 1335 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 MYH1P12882 1939 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 CYP2D7A0A087X1C5 515 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 WTIPA6NIX2 430 aaPredicted RBP11.77□□□□□ -0.53
CHD2-223ENST00000636306 KIF4AO95239 1232 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 ZNF131P52739 623 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 TROAPQ12815 778 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 ANKRD20A2Q5SQ80 823 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 ANKRD20A1Q5TYW2 823 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 ANKRD20A3Q5VUR7 823 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 ANKS1AQ92625 1134 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 LZTS2Q9BRK4 669 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 PYM1Q9BRP8 204 aaKnown RBP11.77□□□□□ -0.53
CHD2-223ENST00000636306 JADE2Q9NQC1 790 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 GJB4Q9NTQ9 266 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 TCP11L1Q9NUJ3 509 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 PANK4Q9NVE7 773 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 PHF24Q9UPV7 400 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 C2CD2Q9Y426 696 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 L3MBTL1Q9Y468 752 aa11.77□□□□□ -0.53
CHD2-223ENST00000636306 CNTNAP5Q8WYK1 1306 aa11.76□□□□□ -0.53
CHD2-223ENST00000636306 TRIM75PA6NK02 468 aa11.76□□□□□ -0.53
CHD2-223ENST00000636306 N4BP3O15049 544 aa11.76□□□□□ -0.53
CHD2-223ENST00000636306 PLSCR1O15162 318 aa11.76□□□□□ -0.53
CHD2-223ENST00000636306 ZNF185O15231 689 aa11.76□□□□□ -0.53
CHD2-223ENST00000636306 PRDM1O75626 825 aa11.76□□□□□ -0.53
CHD2-223ENST00000636306 NPR1P16066 1061 aa11.76□□□□□ -0.53
CHD2-223ENST00000636306 ATP2A2P16615 1042 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms